RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 ATG4CQ96DT6 458 aa29.68■■■□□ 2.34
NKX2-1-204ENST00000522719 P2RX7Q99572 595 aaKnown RBP29.68■■■□□ 2.34
NKX2-1-204ENST00000522719 SLC38A10Q9HBR0 1119 aa29.68■■■□□ 2.34
NKX2-1-204ENST00000522719 FOXD4L1Q9NU39 408 aa29.68■■■□□ 2.34
NKX2-1-204ENST00000522719 PNMA2Q9UL42 364 aa29.68■■■□□ 2.34
NKX2-1-204ENST00000522719 SCG2P13521 617 aa29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 PKN1Q16512 942 aa29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 QRICH1Q2TAL8 776 aa29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 IFNL1Q8IU54 200 aa29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 MB21D1Q8N884 522 aa29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 CWC22Q9HCG8 908 aaKnown RBP29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 CTDP1Q9Y5B0 961 aaPredicted RBP29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 WDR33Q9C0J8 1336 aaKnown RBP29.67■■■□□ 2.34
NKX2-1-204ENST00000522719 hCG_1642624A0A1W2PR95 340 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 hCG_1984214I3L0E3 225 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 HERVK_113P62684 666 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 TRAF1Q13077 416 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 ZNF713Q8N859 430 aaPredicted RBP29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 SPRYD3Q8NCJ5 442 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 PIBF1Q8WXW3 757 aa29.66■■■□□ 2.34
NKX2-1-204ENST00000522719 IGF2BP3O00425 579 aaKnown RBP eCLIP29.65■■■□□ 2.34
NKX2-1-204ENST00000522719 DTNBO60941 627 aa29.65■■■□□ 2.34
NKX2-1-204ENST00000522719 MAP2K2P36507 400 aa29.65■■■□□ 2.34
NKX2-1-204ENST00000522719 OAZ1P54368 228 aa29.65■■■□□ 2.34
NKX2-1-204ENST00000522719 PARK7Q99497 189 aaKnown RBP29.65■■■□□ 2.34
NKX2-1-204ENST00000522719 ZIC5Q96T25 663 aa29.64■■■□□ 2.34
NKX2-1-204ENST00000522719 AMNQ9BXJ7 453 aa29.64■■■□□ 2.34
NKX2-1-204ENST00000522719 AOC2O75106 756 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 VEGFBP49765 207 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 HTRA3P83110 453 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 FBXO11Q86XK2 927 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 FAM177A1Q8N128 213 aaPredicted RBP29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 REPS2Q8NFH8 660 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 ALG1Q9BT22 464 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 SMCHD1A6NHR9 2005 aa29.63■■■□□ 2.33
NKX2-1-204ENST00000522719 ATP2A1O14983 1001 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 ICAM1P05362 532 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 XBP1P17861 261 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 PDCP20941 246 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 SNAP25P60880 206 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 SMCR8Q8TEV9 937 aaPredicted RBP29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 SH3GLB2Q9NR46 395 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 THSD7BQ9C0I4 1608 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 ALDH1A1P00352 501 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 CYP2C8P10632 490 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 GCLCP48506 637 aaPredicted RBP29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 CCDC174Q6PII3 467 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 RGS22Q8NE09 1264 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 BARHL2Q9NY43 387 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 RABGAP1Q9Y3P9 1069 aa29.62■■■□□ 2.33
NKX2-1-204ENST00000522719 ZNF536O15090 1300 aa29.61■■■□□ 2.33
NKX2-1-204ENST00000522719 PPP1R11O60927 126 aaPredicted RBP29.61■■■□□ 2.33
NKX2-1-204ENST00000522719 HEATR3Q7Z4Q2 680 aa29.61■■■□□ 2.33
NKX2-1-204ENST00000522719 PDIA4P13667 645 aaKnown RBP29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 WWC2Q6AWC2 1192 aa29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 CCDC12Q8WUD4 166 aaPredicted RBP29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 AIFM3Q96NN9 605 aa29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 ZNF214Q9UL59 606 aaPredicted RBP29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 PCDHA1Q9Y5I3 950 aa29.6■■■□□ 2.33
NKX2-1-204ENST00000522719 TMEM132BQ14DG7 1078 aa29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 TAF1CQ15572 869 aaPredicted RBP29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 LARP1BQ659C4 914 aaKnown RBP29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 PPP1R18Q6NYC8 613 aa29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 GPKOWQ92917 476 aaPredicted RBP eCLIP29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 C8orf76Q96K31 380 aa29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 RAVER2Q9HCJ3 691 aaKnown RBP29.59■■■□□ 2.33
NKX2-1-204ENST00000522719 STXBP3O00186 592 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 TRIM29Q14134 588 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 POTEEQ6S8J3 1075 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 CPXCR1Q8N123 301 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 CCDC148Q8NFR7 591 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 TEX13BQ9BXU2 312 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 CCPG1Q9ULG6 757 aa29.58■■■□□ 2.33
NKX2-1-204ENST00000522719 ABCB11O95342 1321 aa29.57■■■□□ 2.32
NKX2-1-204ENST00000522719 COA7Q96BR5 231 aa29.57■■■□□ 2.32
NKX2-1-204ENST00000522719 AGBL1Q96MI9 1066 aa29.57■■■□□ 2.32
NKX2-1-204ENST00000522719 BTBD7Q9P203 1132 aa29.57■■■□□ 2.32
NKX2-1-204ENST00000522719 RBPJLQ9UBG7 517 aa29.57■■■□□ 2.32
NKX2-1-204ENST00000522719 STAT3P40763 770 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 NAPAP54920 295 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 USH1GQ495M9 461 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 FBXO18Q8NFZ0 1043 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 ZFYVE28Q9HCC9 887 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 VPS54Q9P1Q0 977 aa29.56■■■□□ 2.32
NKX2-1-204ENST00000522719 CNMDO75829 334 aa29.55■■■□□ 2.32
NKX2-1-204ENST00000522719 TKFCQ3LXA3 575 aa29.55■■■□□ 2.32
NKX2-1-204ENST00000522719 PAGR1Q9BTK6 254 aa29.55■■■□□ 2.32
NKX2-1-204ENST00000522719 MRPL11Q9Y3B7 192 aaKnown RBP29.55■■■□□ 2.32
NKX2-1-204ENST00000522719 ADGRA2Q96PE1 1338 aa29.55■■■□□ 2.32
NKX2-1-204ENST00000522719 ESYT2A0FGR8 921 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 SYT1P21579 422 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 PLS1Q14651 629 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 SNRNP48Q6IEG0 339 aaKnown RBP29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 SPATC1LQ9H0A9 340 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 MORF4L1Q9UBU8 362 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 CA12O43570 354 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 COPB2P35606 906 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 KRT40Q6A162 431 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 GALNT17Q6IS24 598 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 TYW1BQ6NUM6 668 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms