RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PLD6Q8N2A8 252 aaKnown RBP3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 MFSD4AQ8N468 514 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 JMYQ8N9B5 988 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 ZBTB38Q8NAP3 1195 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 BVESQ8NE79 360 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 GIMAP7Q8NHV1 300 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 MRGPRX3Q96LB0 322 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 DSCC1Q9BVC3 393 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 CWC22Q9HCG8 908 aaKnown RBP3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 CHST7Q9NS84 486 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 TMEM260Q9NX78 707 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 PLAGL2Q9UPG8 496 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 GPR55Q9Y2T6 319 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 EMC9Q9Y3B6 208 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 CCDC18Q5T9S5 1454 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 SUPT6HQ7KZ85 1726 aaKnown RBP3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 PTPRKQ15262 1439 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 MYOM3Q5VTT5 1437 aa3.78□□□□□ -1.8
CKS1BP7-201ENST00000522230 KIF14Q15058 1648 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 DHX57Q6P158 1386 aaKnown RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 MAP3K1Q13233 1512 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 GNAT3A8MTJ3 354 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 FAM155AB1AL88 458 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 H3BS24 57 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 AGRPO00253 132 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 NOP56O00567 594 aaKnown RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 SIGLEC6O43699 453 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 IGLV1-40P01703 118 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZNF865P0CJ78 1059 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 HSD3B2P26439 372 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 HOXA10P31260 410 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZNF143P52747 638 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 CYP27C1Q4G0S4 372 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 NKAPLQ5M9Q1 402 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 GTF2IRD2BQ6EKJ0 949 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ARHGAP27Q6ZUM4 889 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 GTF2IRD2Q86UP8 949 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 HOMER1Q86YM7 354 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 TRIM59Q8IWR1 403 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 SPACA3Q8IXA5 215 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 LRRC47Q8N1G4 583 aaKnown RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ARHGEF39Q8N4T4 335 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 APPBP2Q92624 585 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 OSBP2Q969R2 916 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 HSPA12BQ96MM6 686 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 SIN3AQ96ST3 1273 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 CDC6Q99741 560 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 SPOCK3Q9BQ16 436 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 DBNDD2Q9BQY9 259 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 AARSD1Q9BTE6 412 aaKnown RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 IER2Q9BTL4 223 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 OSBPL1AQ9BXW6 950 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 HDAC8Q9BY41 377 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 DUSP15Q9H1R2 295 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 EPN3Q9H201 632 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZSWIM5Q9P217 1185 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 GTF2IRD1Q9UHL9 959 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 FHOD1Q9Y613 1164 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 PTPN23Q9H3S7 1636 aa3.77□□□□□ -1.81
CKS1BP7-201ENST00000522230 ARHGEF11O15085 1522 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ATP10BO94823 1461 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 TRAV20A0A0B4J274 112 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 IQCA1LA6NCM1 817 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 PLEKHD1A6NEE1 506 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 STXBP3O00186 592 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 DYRK3O43781 588 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 RAPGEF3O95398 923 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CAPNS1P04632 268 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CD3EP07766 207 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 NAT2P11245 290 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 PABPC1P11940 636 aaKnown RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 IFNGR1P15260 489 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CD96P40200 585 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ECI1P42126 302 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 KIR3DL1P43629 444 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 KCNJ6P48051 423 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 GYS2P54840 703 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 HSP90AA2PQ14568 343 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CLEC16AQ2KHT3 1053 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 PLEKHG4Q58EX7 1191 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 DUSP27Q5VZP5 1158 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZPBP2Q6X784 338 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 C16orf86Q6ZW13 317 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZDHHC13Q8IUH4 622 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZSWIM2Q8NEG5 633 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 SYTL5Q8TDW5 730 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 KISS1RQ969F8 398 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ZNF669Q96BR6 464 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 TCTN2Q96GX1 697 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 SGSM3Q96HU1 749 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 GPATCH3Q96I76 525 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CLUHP3Q96NS8 147 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ATG3Q9NT62 314 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 CFDP1Q9UEE9 299 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 KCNH3Q9ULD8 1083 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 MRPS23Q9Y3D9 190 aaKnown RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ST14Q9Y5Y6 855 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 TROQ12816 1431 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 SETD5Q9C0A6 1442 aa3.76□□□□□ -1.81
CKS1BP7-201ENST00000522230 ABCA8O94911 1581 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms