RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 WDR18Q9BV38 432 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 GLIS2Q9BZE0 524 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 CPVLQ9H3G5 476 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 BARHL2Q9NY43 387 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 BTBD18B2RXH4 712 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 BMP3P12645 472 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 PTPRAP18433 802 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 NBR1Q14596 966 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
SHPRH-209ENST00000521977 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 TYW1BQ6NUM6 668 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 NOSTRINQ8IVI9 506 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 TNFRSF25Q93038 417 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 PIGSQ96S52 555 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 KIAA1683Q9H0B3 1180 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 ELP1O95163 1332 aa10.97□□□□□ -0.65
SHPRH-209ENST00000521977 PNMA6FA0A0J9YX94 578 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 ESYT2A0FGR8 921 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 M0R2N6 131 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 ZBTB5O15062 677 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CALML3P27482 149 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 KRT2P35908 639 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 SLC16A2P36021 539 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 FOXK1P85037 733 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 MAP3K11Q16584 847 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CSPP1Q1MSJ5 1256 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 GALNT17Q6IS24 598 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 DLK2Q6UY11 383 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CCDC84Q86UT8 332 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 OXER1Q8TDS5 423 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 PIBF1Q8WXW3 757 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 ZKSCAN4Q969J2 545 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CDCA5Q96FF9 252 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 SCAND2PQ9GZW5 306 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 ZMYND12Q9H0C1 365 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 GDPD2Q9HCC8 539 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 SEC63Q9UGP8 760 aaKnown RBP10.96□□□□□ -0.65
SHPRH-209ENST00000521977 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
SHPRH-209ENST00000521977 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 TMEM232C9JQI7 657 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 FIBPO43427 364 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 PPP1R11O60927 126 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 NASPP49321 788 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 NLRP5P59047 1200 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 NR5A1Q13285 461 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 EAPPQ56P03 285 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 SYDE2Q5VT97 1194 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 HEATR3Q7Z4Q2 680 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 CCDC12Q8WUD4 166 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 LEO1Q8WVC0 666 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 LPAR1Q92633 364 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 USP28Q96RU2 1077 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 VAT1LQ9HCJ6 419 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 BRMS1Q9HCU9 246 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 TFIP11Q9UBB9 837 aaKnown RBP10.95□□□□□ -0.66
SHPRH-209ENST00000521977 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 PCDHA4Q9UN74 947 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 FZD1Q9UP38 647 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 OTOFQ9HC10 1997 aa10.95□□□□□ -0.66
SHPRH-209ENST00000521977 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
SHPRH-209ENST00000521977 RAD21O60216 631 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 PPP1R12BO60237 982 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-209ENST00000521977 TRAK2O60296 914 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 YEATS4O95619 227 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
SHPRH-209ENST00000521977 STAT2P52630 851 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 USP14P54578 494 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 MAP3K9P80192 1104 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 GNL2Q13823 731 aaKnown RBP10.94□□□□□ -0.66
SHPRH-209ENST00000521977 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 SKOR2Q2VWA4 1001 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-209ENST00000521977 FAM83BQ5T0W9 1011 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 FAM160B2Q86V87 743 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 BLIDQ8IZY5 108 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 ZNF280CQ8ND82 737 aa10.94□□□□□ -0.66
SHPRH-209ENST00000521977 C12orf42Q96LP6 360 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms