RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TRIM22Q8IYM9 498 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 DNAJC5GQ8N7S2 189 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 SMARCC2Q8TAQ2 1214 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 CTDP1Q9Y5B0 961 aaPredicted RBP27.97■■■□□ 2.07
PVT1-212ENST00000521951 PNMA6FA0A0J9YX94 578 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 AKAP17AQ02040 695 aaKnown RBP27.97■■■□□ 2.07
PVT1-212ENST00000521951 CCDC174Q6PII3 467 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 MB21D1Q8N884 522 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 GTF3C2Q8WUA4 911 aaPredicted RBP27.97■■■□□ 2.07
PVT1-212ENST00000521951 BTBD7Q9P203 1132 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 RBPJLQ9UBG7 517 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 PEX10O60683 326 aa27.96■■■□□ 2.07
PVT1-212ENST00000521951 TMEM132BQ14DG7 1078 aa27.96■■■□□ 2.07
PVT1-212ENST00000521951 DDX11Q96FC9 970 aa27.96■■■□□ 2.07
PVT1-212ENST00000521951 ZFYVE28Q9HCC9 887 aa27.96■■■□□ 2.07
PVT1-212ENST00000521951 RBM27Q9P2N5 1060 aaKnown RBP27.96■■■□□ 2.07
PVT1-212ENST00000521951 SEC63Q9UGP8 760 aaKnown RBP27.96■■■□□ 2.07
PVT1-212ENST00000521951 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.96■■■□□ 2.07
PVT1-212ENST00000521951 SMCHD1A6NHR9 2005 aa27.95■■■□□ 2.07
PVT1-212ENST00000521951 CA12O43570 354 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 CNMDO75829 334 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 FDPSP14324 419 aaKnown RBP27.95■■■□□ 2.06
PVT1-212ENST00000521951 GCLCP48506 637 aaPredicted RBP27.95■■■□□ 2.06
PVT1-212ENST00000521951 PKN1Q16512 942 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 CPXCR1Q8N123 301 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 PAGR1Q9BTK6 254 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 RAVER2Q9HCJ3 691 aaKnown RBP27.95■■■□□ 2.06
PVT1-212ENST00000521951 TXNRD2Q9NNW7 524 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 ORC3Q9UBD5 711 aaPredicted RBP27.95■■■□□ 2.06
PVT1-212ENST00000521951 RABGAP1Q9Y3P9 1069 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 ZNF536O15090 1300 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 ADGRA2Q96PE1 1338 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 STK36Q9NRP7 1315 aa27.95■■■□□ 2.06
PVT1-212ENST00000521951 PPP1R11O60927 126 aaPredicted RBP27.94■■■□□ 2.06
PVT1-212ENST00000521951 CRHR2Q13324 411 aa27.94■■■□□ 2.06
PVT1-212ENST00000521951 INTS4Q96HW7 963 aaKnown RBP27.94■■■□□ 2.06
PVT1-212ENST00000521951 ZNF214Q9UL59 606 aaPredicted RBP27.94■■■□□ 2.06
PVT1-212ENST00000521951 DEXIO95424 95 aa27.93■■■□□ 2.06
PVT1-212ENST00000521951 PFKFB3Q16875 520 aaPredicted RBP27.93■■■□□ 2.06
PVT1-212ENST00000521951 FBXO11Q86XK2 927 aa27.93■■■□□ 2.06
PVT1-212ENST00000521951 AGBL1Q96MI9 1066 aa27.93■■■□□ 2.06
PVT1-212ENST00000521951 FOXD4L1Q9NU39 408 aa27.93■■■□□ 2.06
PVT1-212ENST00000521951 ATP2A1O14983 1001 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 TLR2O60603 784 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 ICAM1P05362 532 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 OAZ1P54368 228 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 HMGN5P82970 282 aaKnown RBP27.92■■■□□ 2.06
PVT1-212ENST00000521951 RNF186Q9NXI6 227 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 SMC3Q9UQE7 1217 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 SCG2P13521 617 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 PLS1Q14651 629 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 Q3C1V9 767 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 ANKRD13CQ8N6S4 541 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 AMNQ9BXJ7 453 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 CPA4Q9UI42 421 aa27.92■■■□□ 2.06
PVT1-212ENST00000521951 TRPA1O75762 1119 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 TAL1P17542 331 aaPredicted RBP27.91■■■□□ 2.06
PVT1-212ENST00000521951 STAT3P40763 770 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 SLC4A3P48751 1232 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 COA7Q96BR5 231 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 AIFM3Q96NN9 605 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 R3HDMLQ9H3Y0 253 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 MORF4L1Q9UBU8 362 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 CCPG1Q9ULG6 757 aa27.91■■■□□ 2.06
PVT1-212ENST00000521951 HSP90AA1P07900 732 aaKnown RBP27.9■■■□□ 2.06
PVT1-212ENST00000521951 ERVK-9P63128 1117 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 ERVK-24P63145 666 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 USH1GQ495M9 461 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 SNRNP48Q6IEG0 339 aaKnown RBP27.9■■■□□ 2.06
PVT1-212ENST00000521951 C17orf99Q6UX52 265 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 SPRYD3Q8NCJ5 442 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 GPKOWQ92917 476 aaPredicted RBP eCLIP27.9■■■□□ 2.06
PVT1-212ENST00000521951 TEX13BQ9BXU2 312 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 SPATC1LQ9H0A9 340 aa27.9■■■□□ 2.06
PVT1-212ENST00000521951 BCRP11274 1271 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 GJB2P29033 226 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 WWC2Q6AWC2 1192 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 HEATR3Q7Z4Q2 680 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 GPRC5AQ8NFJ5 357 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 PNMA2Q9UL42 364 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 PCDHA1Q9Y5I3 950 aa27.89■■■□□ 2.06
PVT1-212ENST00000521951 TBC1D8O95759 1140 aa27.88■■■□□ 2.05
PVT1-212ENST00000521951 WASF1Q92558 559 aa27.88■■■□□ 2.05
PVT1-212ENST00000521951 CFHR5Q9BXR6 569 aa27.88■■■□□ 2.05
PVT1-212ENST00000521951 RIPK3Q9Y572 518 aa27.88■■■□□ 2.05
PVT1-212ENST00000521951 ALAS1P13196 640 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 MAP2K1Q02750 393 aaPredicted RBP27.87■■■□□ 2.05
PVT1-212ENST00000521951 TRAF1Q13077 416 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 FAM110CQ1W6H9 321 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 RIOX2Q8IUF8 465 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 FAM184AQ8NB25 1140 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 ALG1Q9BT22 464 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 MOV10L1Q9BXT6 1211 aaKnown RBP27.87■■■□□ 2.05
PVT1-212ENST00000521951 BARHL2Q9NY43 387 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 hCG_1984214I3L0E3 225 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 STXBP3O00186 592 aa27.87■■■□□ 2.05
PVT1-212ENST00000521951 ZNF713Q8N859 430 aaPredicted RBP27.87■■■□□ 2.05
PVT1-212ENST00000521951 ABCB11O95342 1321 aa27.86■■■□□ 2.05
PVT1-212ENST00000521951 TYW1BQ6NUM6 668 aa27.86■■■□□ 2.05
PVT1-212ENST00000521951 TKFCQ3LXA3 575 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms