RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ADGRD1Q6QNK2 874 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 PABPC5Q96DU9 382 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 TRPV6Q9H1D0 765 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 MTUS1Q9ULD2 1270 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 OTOGLQ3ZCN5 2332 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
CTNNA1-227ENST00000521387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 MBTPS2O43462 519 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 KDM4AO75164 1064 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 PDE8BO95263 885 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 ASNSP08243 561 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 BTDP43251 543 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 DLX2Q07687 328 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 SLFN5Q08AF3 891 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 SIGLEC14Q08ET2 396 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 TSPYL6Q8N831 410 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 EXOC6Q8TAG9 804 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 ZFP91Q96JP5 570 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 TINF2Q9BSI4 451 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 TET1Q8NFU7 2136 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
CTNNA1-227ENST00000521387 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 ASH1LQ9NR48 2969 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 B4GALT4O60513 344 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 GDF11O95390 407 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 TCEAL5Q5H9L2 206 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 CCDC30Q5VVM6 783 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 KIAA2013Q8IYS2 634 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 SHCBP1Q8NEM2 672 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 KAZALD1Q96I82 304 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 SPATC1LQ9H0A9 340 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 MYH16Q9H6N6 1097 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 ZBTB21Q9ULJ3 1066 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 FAM50BQ9Y247 325 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 KIF16BQ96L93 1317 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 SALL1Q9NSC2 1324 aa9.03□□□□□ -0.96
CTNNA1-227ENST00000521387 LINC01553A4QN01 128 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 C2orf72A6NCS6 295 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 KIF28PB7ZC32 967 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 SNAI1O95863 264 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 PGK2P07205 417 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 PFKMP08237 780 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 VCAM1P19320 739 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 CLUL1Q15846 466 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 TMEM105Q8N8V8 129 aa9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 UPF3AQ9H1J1 476 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-227ENST00000521387 ZNFX1Q9P2E3 1918 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 GPR75-ASB3A0A0A6YYF3 556 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 STXBP3O00186 592 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 C6orf222P0C671 652 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 ARP10275 920 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 GJA9P57773 515 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 METTL16Q86W50 562 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 PCSK9Q8NBP7 692 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 ACER1Q8TDN7 264 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 DNAAF4Q8WXU2 420 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 MRPL38Q96DV4 380 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 CCDC136Q96JN2 1154 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 TGS1Q96RS0 853 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 SH2B1Q9NRF2 756 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 SLC5A4Q9NY91 659 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 SPEGQ15772 3267 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 ZZEF1O43149 2961 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 TNKSO95271 1327 aa9.01□□□□□ -0.97
CTNNA1-227ENST00000521387 NKX3-2P78367 333 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 GNASQ5JWF2 1037 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 CXCL17Q6UXB2 119 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 EP400NLQ6ZTU2 488 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 BANK1Q8NDB2 785 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 RUNDC1Q96C34 613 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
CTNNA1-227ENST00000521387 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 RPAP3Q9H6T3 665 aaPredicted RBP9□□□□□ -0.97
CTNNA1-227ENST00000521387 CLDND1Q9NY35 253 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
CTNNA1-227ENST00000521387 NAV2Q8IVL1 2488 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms