RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 NUP43Q8NFH3 380 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 ZDHHC15Q96MV8 337 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 SRRTQ9BXP5 876 aaKnown RBP7.25□□□□□ -1.25
SKP1-207ENST00000520417 SIRT5Q9NXA8 310 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 PRR13Q9NZ81 148 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 PCDHB10Q9UN67 800 aa7.25□□□□□ -1.25
SKP1-207ENST00000520417 UNCXA6NJT0 531 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 ARL4AP40617 200 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 NASPP49321 788 aaPredicted RBP7.24□□□□□ -1.25
SKP1-207ENST00000520417 DLG4P78352 724 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 JAMLQ86YT9 394 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 IRF2BPLQ9H1B7 796 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 CD320Q9NPF0 282 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 KIAA1522Q9P206 1035 aaPredicted RBP7.24□□□□□ -1.25
SKP1-207ENST00000520417 ZNF214Q9UL59 606 aaPredicted RBP7.24□□□□□ -1.25
SKP1-207ENST00000520417 LTBP3Q9NS15 1303 aa7.24□□□□□ -1.25
SKP1-207ENST00000520417 PEX10O60683 326 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 CD3EP07766 207 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 MED14OSP0DP75 135 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 PNLIPP16233 465 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 NOP2P46087 812 aaKnown RBP7.23□□□□□ -1.25
SKP1-207ENST00000520417 LINC00310P59036 64 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 CYP4F8P98187 520 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 SLC12A9Q9BXP2 914 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 IMPACTQ9P2X3 320 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 CNOT6Q9ULM6 557 aaKnown RBP7.23□□□□□ -1.25
SKP1-207ENST00000520417 INPP5FQ9Y2H2 1132 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 SF3B6Q9Y3B4 125 aaKnown RBP7.23□□□□□ -1.25
SKP1-207ENST00000520417 SLC12A7Q9Y666 1083 aa7.23□□□□□ -1.25
SKP1-207ENST00000520417 TEX51A0A1B0GUA7 166 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 A0A1W2PQJ5 194 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 SEMA7AO75326 666 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 MPOP05164 745 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 SOX9P48436 509 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 RAB3GAP1Q15042 981 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 RTP2Q5QGT7 225 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 HEATR6Q6AI08 1181 aaKnown RBP7.22□□□□□ -1.25
SKP1-207ENST00000520417 SPOCD1Q6ZMY3 1216 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 CILP2Q8IUL8 1156 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 JMJD8Q96S16 334 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 ACBD3Q9H3P7 528 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 FHOD1Q9Y613 1164 aa7.22□□□□□ -1.25
SKP1-207ENST00000520417 A0A1W2PQ45 241 aaPredicted RBP7.21□□□□□ -1.26
SKP1-207ENST00000520417 A0A1W2PQY0 241 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 GIPRP48546 466 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 POU4F1Q01851 419 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 FBLN7Q53RD9 439 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 HLA-DQA1Q5Y7H0 255 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 RGS22Q8NE09 1264 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 FGD4Q96M96 766 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 HAUS7Q99871 368 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.26
SKP1-207ENST00000520417 ARID1BQ8NFD5 2236 aaPredicted RBP7.21□□□□□ -1.26
SKP1-207ENST00000520417 A0A1W2PQH9 124 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 IFNGR1P15260 489 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 VIPR1P32241 457 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 LAPTM5Q13571 262 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 KRTAP19-4Q3LI73 84 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 OLFML2BQ68BL8 750 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 LCNL1Q6ZST4 164 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 OR6P1Q8NGX9 317 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 RASGRP4Q8TDF6 673 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
SKP1-207ENST00000520417 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
SKP1-207ENST00000520417 CBFA2T2O43439 604 aa7.19□□□□□ -1.26
SKP1-207ENST00000520417 DPY19L1Q2PZI1 675 aa7.19□□□□□ -1.26
SKP1-207ENST00000520417 FCRL3Q96P31 734 aaPredicted RBP7.19□□□□□ -1.26
SKP1-207ENST00000520417 TGIF2Q9GZN2 237 aa7.19□□□□□ -1.26
SKP1-207ENST00000520417 WHRNQ9P202 907 aa7.19□□□□□ -1.26
SKP1-207ENST00000520417 KCTD3Q9Y597 815 aa7.19□□□□□ -1.26
SKP1-207ENST00000520417 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 VAMP4O75379 141 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 PPM1BO75688 479 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 EPHX1P07099 455 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 GJA8P48165 433 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 TMC6Q7Z403 805 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 GCM1Q9NP62 436 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 MBD1Q9UIS9 605 aaPredicted RBP7.18□□□□□ -1.26
SKP1-207ENST00000520417 DIS3Q9Y2L1 958 aaKnown RBP7.18□□□□□ -1.26
SKP1-207ENST00000520417 IRAK3Q9Y616 596 aa7.18□□□□□ -1.26
SKP1-207ENST00000520417 STXBP3O00186 592 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 RFXAPO00287 272 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 ABLIM1O14639 778 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 FGF10O15520 208 aaPredicted RBP7.17□□□□□ -1.26
SKP1-207ENST00000520417 TBC1D8O95759 1140 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 TACR1P25103 407 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 EPHB3P54753 998 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms