RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
VPS37A-206ENST00000520140 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
VPS37A-206ENST00000520140 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
VPS37A-206ENST00000520140 AGBL1Q96MI9 1066 aa16.49■□□□□ 0.23
VPS37A-206ENST00000520140 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
VPS37A-206ENST00000520140 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
VPS37A-206ENST00000520140 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
VPS37A-206ENST00000520140 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 ZBED4O75132 1171 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 Q3C1V9 767 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 HOMER2Q9NSB8 354 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 RNF186Q9NXI6 227 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 PPP1R11O60927 126 aaPredicted RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 FOSBP53539 338 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 AIFM3Q96NN9 605 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
VPS37A-206ENST00000520140 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 ADAMTS5Q9UNA0 930 aa16.48■□□□□ 0.23
VPS37A-206ENST00000520140 ZNF536O15090 1300 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 ZBTB5O15062 677 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 HSP90AA1P07900 732 aaKnown RBP16.47■□□□□ 0.23
VPS37A-206ENST00000520140 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
VPS37A-206ENST00000520140 TRIM22Q8IYM9 498 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 COA7Q96BR5 231 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
VPS37A-206ENST00000520140 CA12O43570 354 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 TLR2O60603 784 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 CNMDO75829 334 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 CDKL5O76039 1030 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 RIPK3Q9Y572 518 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 FDPSP14324 419 aaKnown RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 MTMR8Q96EF0 704 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 RNF26Q9BY78 433 aaPredicted RBP16.46■□□□□ 0.23
VPS37A-206ENST00000520140 GJB4Q9NTQ9 266 aa16.46■□□□□ 0.23
VPS37A-206ENST00000520140 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 PRPF3O43395 683 aaKnown RBP16.45■□□□□ 0.22
VPS37A-206ENST00000520140 ALAS1P13196 640 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 ERVK-9P63128 1117 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 ERVK-24P63145 666 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 BECN1Q14457 450 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 PKN1Q16512 942 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 RABGAP1Q9Y3P9 1069 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 STAT3P40763 770 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
VPS37A-206ENST00000520140 CUL4AQ13619 759 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
VPS37A-206ENST00000520140 ICAM1P05362 532 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
VPS37A-206ENST00000520140 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 NCAPG2Q86XI2 1143 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 PORCNQ9H237 461 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
VPS37A-206ENST00000520140 SCG2P13521 617 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 GJB2P29033 226 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
VPS37A-206ENST00000520140 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
VPS37A-206ENST00000520140 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
VPS37A-206ENST00000520140 DEXIO95424 95 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 FDX1P10109 184 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
VPS37A-206ENST00000520140 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
VPS37A-206ENST00000520140 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
VPS37A-206ENST00000520140 BCRP11274 1271 aa16.42■□□□□ 0.22
VPS37A-206ENST00000520140 ERCC3P19447 782 aa16.42■□□□□ 0.22
VPS37A-206ENST00000520140 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
VPS37A-206ENST00000520140 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
VPS37A-206ENST00000520140 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
VPS37A-206ENST00000520140 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms