RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 ATP2A1O14983 1001 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 CDC27P30260 824 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 COPB2P35606 906 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 STAT3P40763 770 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 LACTBP83111 547 aaPredicted RBP28.14■■■□□ 2.1
PCM1-209ENST00000518930 SNRNP48Q6IEG0 339 aaKnown RBP28.14■■■□□ 2.1
PCM1-209ENST00000518930 RIOX1Q9H6W3 641 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 JMJD4Q9H9V9 463 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 PNMA2Q9UL42 364 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 LIMCH1Q9UPQ0 1083 aa28.14■■■□□ 2.1
PCM1-209ENST00000518930 SLC4A3P48751 1232 aa28.13■■■□□ 2.09
PCM1-209ENST00000518930 Q3C1V9 767 aa28.13■■■□□ 2.09
PCM1-209ENST00000518930 NBPF11Q86T75 865 aa28.13■■■□□ 2.09
PCM1-209ENST00000518930 HOMER1Q86YM7 354 aa28.13■■■□□ 2.09
PCM1-209ENST00000518930 CMTR1Q8N1G2 835 aaKnown RBP28.13■■■□□ 2.09
PCM1-209ENST00000518930 SRBD1Q8N5C6 995 aaKnown RBP28.13■■■□□ 2.09
PCM1-209ENST00000518930 RRP36Q96EU6 259 aaKnown RBP28.13■■■□□ 2.09
PCM1-209ENST00000518930 MOV10L1Q9BXT6 1211 aaKnown RBP28.13■■■□□ 2.09
PCM1-209ENST00000518930 SEC63Q9UGP8 760 aaKnown RBP28.13■■■□□ 2.09
PCM1-209ENST00000518930 CCPG1Q9ULG6 757 aa28.13■■■□□ 2.09
PCM1-209ENST00000518930 CPLX1O14810 134 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 CYTH3O43739 400 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 SLC25A27O95847 323 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 ICAM1P05362 532 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 ADD1P35611 737 aaKnown RBP28.12■■■□□ 2.09
PCM1-209ENST00000518930 LBX1P52954 281 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 WDR78Q5VTH9 848 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 CPLX2Q6PUV4 134 aaKnown RBP28.12■■■□□ 2.09
PCM1-209ENST00000518930 NCAPG2Q86XI2 1143 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 RIOX2Q8IUF8 465 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 CCDC82Q8N4S0 544 aa28.12■■■□□ 2.09
PCM1-209ENST00000518930 NCOA5Q9HCD5 579 aaKnown RBP28.12■■■□□ 2.09
PCM1-209ENST00000518930 FAM217BQ9NTX9 383 aaPredicted RBP28.12■■■□□ 2.09
PCM1-209ENST00000518930 ZBTB5O15062 677 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 PFKFB2O60825 505 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 ECM2O94769 699 aaPredicted RBP28.11■■■□□ 2.09
PCM1-209ENST00000518930 MAPK4P31152 587 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 FCGRTP55899 365 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 ARHGEF6Q15052 776 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 QRICH1Q2TAL8 776 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 SHCBP1Q8NEM2 672 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 CD99L2Q8TCZ2 262 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 PIBF1Q8WXW3 757 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 PIGSQ96S52 555 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 ZNF536O15090 1300 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 CNTNAP5Q8WYK1 1306 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 ZSWIM8A7E2V4 1837 aa28.11■■■□□ 2.09
PCM1-209ENST00000518930 BAZ2BQ9UIF8 2168 aaKnown RBP28.1■■■□□ 2.09
PCM1-209ENST00000518930 MCM2P49736 904 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 ME3Q16798 604 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 SLC35G1Q2M3R5 365 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 MTMR8Q96EF0 704 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 ZSCAN31Q96LW9 406 aaPredicted RBP28.1■■■□□ 2.09
PCM1-209ENST00000518930 AGBL1Q96MI9 1066 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 PORCNQ9H237 461 aa28.1■■■□□ 2.09
PCM1-209ENST00000518930 TNPO2O14787 897 aaKnown RBP28.09■■■□□ 2.09
PCM1-209ENST00000518930 FMNL1O95466 1100 aaPredicted RBP28.09■■■□□ 2.09
PCM1-209ENST00000518930 ERCC3P19447 782 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 PSMC4P43686 418 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 SCRN1Q12765 414 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 TKFCQ3LXA3 575 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 FBXO11Q86XK2 927 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 MROH8Q9H579 483 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 EFCC1Q9HA90 598 aa28.09■■■□□ 2.09
PCM1-209ENST00000518930 PLXNB2O15031 1838 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 PNMA6FA0A0J9YX94 578 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 LARGE1O95461 756 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 ALAS1P13196 640 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 TRAF1Q13077 416 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 USH1GQ495M9 461 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 AMNQ9BXJ7 453 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 SH2B1Q9NRF2 756 aaPredicted RBP28.08■■■□□ 2.09
PCM1-209ENST00000518930 HOMER2Q9NSB8 354 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 CASP8AP2Q9UKL3 1982 aa28.08■■■□□ 2.09
PCM1-209ENST00000518930 CDKL5O76039 1030 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 GTF3C6Q969F1 213 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 COA7Q96BR5 231 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 ARHGAP39Q9C0H5 1083 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 RNF146Q9NTX7 359 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 FBXO40Q9UH90 709 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 IVNS1ABPQ9Y6Y0 642 aa28.07■■■□□ 2.08
PCM1-209ENST00000518930 IFNAR1P17181 557 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 AKAP17AQ02040 695 aaKnown RBP28.06■■■□□ 2.08
PCM1-209ENST00000518930 FUT2Q10981 343 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 GPR142Q7Z601 462 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 PLEKHH3Q7Z736 793 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 CHST13Q8NET6 341 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 RBM27Q9P2N5 1060 aaKnown RBP28.06■■■□□ 2.08
PCM1-209ENST00000518930 RIPK3Q9Y572 518 aa28.06■■■□□ 2.08
PCM1-209ENST00000518930 RBBP6Q7Z6E9 1792 aaKnown RBP28.06■■■□□ 2.08
PCM1-209ENST00000518930 ABCB11O95342 1321 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 TRIM22Q8IYM9 498 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 NECAB1Q8N987 351 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 TRIM47Q96LD4 638 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 TRERF1Q96PN7 1200 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 ACAD9Q9H845 621 aa28.05■■■□□ 2.08
PCM1-209ENST00000518930 GNRH1P01148 92 aa28.04■■■□□ 2.08
PCM1-209ENST00000518930 PHKBQ93100 1093 aa28.04■■■□□ 2.08
PCM1-209ENST00000518930 SLC26A6Q9BXS9 759 aa28.04■■■□□ 2.08
PCM1-209ENST00000518930 RNF26Q9BY78 433 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms