RNA–Protein interactions for RNA: ENST00000517608.5

UBE2W-203, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 8,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-203ENST00000517608 RNF41Q9H4P4 317 aaPredicted RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 C1orf115Q9H7X2 142 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 PLCB1Q9NQ66 1216 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 DKK3Q9UBP4 350 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 A0A0D9SFI3 127 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 LIN7AO14910 233 aaPredicted RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 MRPL12P52815 198 aaKnown RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 LACTBP83111 547 aaPredicted RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 CCDC186Q7Z3E2 898 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 C16orf45Q96MC5 204 aaPredicted RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 RAB3IPQ96QF0 476 aaPredicted RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 TFIP11Q9UBB9 837 aaKnown RBP3.97□□□□□ -1.77
UBE2W-203ENST00000517608 RABGAP1Q9Y3P9 1069 aa3.97□□□□□ -1.77
UBE2W-203ENST00000517608 FANCGO15287 622 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 TROVE2P10155 538 aaKnown RBP eCLIP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 XPCQ01831 940 aaPredicted RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 C1orf141Q5JVX7 400 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 NOL8Q76FK4 1167 aaKnown RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 MICALL1Q8N3F8 863 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 LRRC15Q8TF66 581 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 OSBPL5Q9H0X9 879 aaPredicted RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 DENND2AQ9ULE3 1009 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 NOTCH4Q99466 2003 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 EIF3CLB5ME19 914 aaKnown RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 MYO1CO00159 1063 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 CCAR1Q8IX12 1150 aaKnown RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 DNAJC10Q8IXB1 793 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 LRRC45Q96CN5 670 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 UIMC1Q96RL1 719 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 PUS3Q9BZE2 481 aaKnown RBP3.96□□□□□ -1.77
UBE2W-203ENST00000517608 DEFB129Q9H1M3 183 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 PPCSQ9HAB8 311 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 ZNF287Q9HBT7 754 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 PDRG1Q9NUG6 133 aa3.96□□□□□ -1.77
UBE2W-203ENST00000517608 PNPLA7Q6ZV29 1317 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 TOP1P11387 765 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 DESP17661 470 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CYP2C19P33261 490 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 MTMR3Q13615 1198 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SLC4A8Q2Y0W8 1093 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 POTEEQ6S8J3 1075 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 APBB1IPQ7Z5R6 666 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 TMTC1Q8IUR5 882 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SPRYD3Q8NCJ5 442 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 NUP58Q9BVL2 599 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 FAM184BQ9ULE4 1060 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SURF6O75683 361 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SNRPA1P09661 255 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZSCAN22P10073 491 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 MRPS35P82673 323 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CBX1P83916 185 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 TYRO3Q06418 890 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 FKBP15Q5T1M5 1219 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 GKAP1Q5VSY0 366 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CACNA2D3Q8IZS8 1091 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZNF280CQ8ND82 737 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ANKS1AQ92625 1134 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 PAIP2BQ9ULR5 123 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZNF536O15090 1300 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 PLXNB3Q9ULL4 1909 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 IKBKBO14920 756 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 KCNQ2O43526 872 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CYP21A2P08686 494 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZBTB48P10074 688 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 DDR1Q08345 913 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SEPT6Q14141 434 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SPA17Q15506 151 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 PLEKHO1Q53GL0 409 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 C10orf76Q5T2E6 689 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 TMTC2Q8N394 836 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ECHDC1Q9NTX5 307 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 FAN1Q9Y2M0 1017 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 GAKO14976 1311 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SART1O43290 800 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 MARCH6O60337 910 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 PNMA6AP0CW24 399 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 KCNA3P22001 575 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 FECHP22830 423 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CYLC1P35663 651 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 CTNNBL1Q8WYA6 563 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 DNAI2Q9GZS0 605 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SSC5DA1L4H1 1573 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 MAST3O60307 1309 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 GRM8O00222 908 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZNF131P52739 623 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 SMYD5Q6GMV2 418 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 PDCD7Q8N8D1 485 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 AFAP1L1Q8TED9 768 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 XAGE3Q8WTP9 111 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 STAMBPL1Q96FJ0 436 aa3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ZNF830Q96NB3 372 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 RTFDC1Q9BY42 306 aaPredicted RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 GNL3LQ9NVN8 582 aaKnown RBP3.96□□□□□ -1.78
UBE2W-203ENST00000517608 ME1P48163 572 aa3.95□□□□□ -1.78
UBE2W-203ENST00000517608 SLC4A3P48751 1232 aa3.95□□□□□ -1.78
UBE2W-203ENST00000517608 ODF2Q5BJF6 829 aa3.95□□□□□ -1.78
UBE2W-203ENST00000517608 FBXO33Q7Z6M2 555 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms