RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 A0A1W2PQD8 194 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 CMA1P23946 247 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 GNA11P29992 359 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 SPP2Q13103 211 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 PTGDRQ13258 359 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 UBE2SQ16763 222 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 USH1GQ495M9 461 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 DCAF15Q66K64 600 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 GALNT17Q6IS24 598 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 LRSAM1Q6UWE0 723 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 CCDC73Q6ZRK6 1079 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 FMR1NBQ8N0W7 255 aaPredicted RBP10.46□□□□□ -0.73
CPNE4-213ENST00000515418 DAGLBQ8NCG7 672 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
CPNE4-213ENST00000515418 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 DCPSQ96C86 337 aaKnown RBP10.46□□□□□ -0.73
CPNE4-213ENST00000515418 FEZ1Q99689 392 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 PANK2Q9BZ23 570 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 ZNF112Q9UJU3 913 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 FBXO2Q9UK22 296 aaPredicted RBP10.46□□□□□ -0.73
CPNE4-213ENST00000515418 NOL7Q9UMY1 257 aaKnown RBP10.46□□□□□ -0.73
CPNE4-213ENST00000515418 GLTPD2A6NH11 291 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 PTPREP23469 700 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 ADCY7P51828 1080 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 STAT2P52630 851 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 FAM160A1Q05DH4 1040 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 USP49Q70CQ1 688 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 KRT26Q7Z3Y9 468 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 JMYQ8N9B5 988 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.74
CPNE4-213ENST00000515418 ERCC4Q92889 916 aaPredicted RBP10.46□□□□□ -0.74
CPNE4-213ENST00000515418 KLRG1Q96E93 195 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 NUP62CLQ9H1M0 184 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 TNMDQ9H2S6 317 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 PSTPIP2Q9H939 334 aa10.46□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 GRIN3BO60391 1043 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP2O75604 605 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 PFKFB1P16118 471 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 PTPRAP18433 802 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 EPHX2P34913 555 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 MTMR2Q13614 643 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SUPT20HL1Q3ZLR7 823 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 EAPPQ56P03 285 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SCYL3Q8IZE3 742 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 REXO1Q8N1G1 1221 aaKnown RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 RBSNQ9H1K0 784 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 CLSTN2Q9H4D0 955 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SYNPO2Q9UMS6 1093 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 CEP131Q9UPN4 1083 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 ZHX2Q9Y6X8 837 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SSC5DA1L4H1 1573 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 POTECB2RU33 542 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 hCG_1984214I3L0E3 225 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 CUTAO60888 179 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 ZNF202O95125 648 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 IL17AQ16552 155 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 RESP18Q5W5W9 173 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 ZNF713Q8N859 430 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 C4orf32Q8N8J7 132 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 TBCKQ8TEA7 893 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 L3MBTL3Q96JM7 780 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 AMNQ9BXJ7 453 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 CSRNP2Q9H175 543 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SH2D4AQ9H788 454 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 PICK1Q9NRD5 415 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
CPNE4-213ENST00000515418 DDX19AQ9NUU7 478 aaKnown RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 SRPRBQ9Y5M8 271 aaKnown RBP10.45□□□□□ -0.74
CPNE4-213ENST00000515418 EDIL3O43854 480 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 TRAPPC10P48553 1259 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 NONOQ15233 471 aaKnown RBP eCLIP10.44□□□□□ -0.74
CPNE4-213ENST00000515418 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 CHURC1Q8WUH1 139 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 CUL5Q93034 780 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 HOOK2Q96ED9 719 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 EPSTI1Q96J88 318 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 TMEM60Q9H2L4 133 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 GRPEL1Q9HAV7 217 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 PPP2R3BQ9Y5P8 575 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 PITPNM2Q9BZ72 1349 aa10.44□□□□□ -0.74
CPNE4-213ENST00000515418 A0A087WWV3 80 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms