RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 KIF18BQ86Y91 864 aa10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 BRF1Q92994 677 aa10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 TTC1Q99614 292 aa10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 PRDM14Q9GZV8 571 aa10.28□□□□□ -0.76
LDHBP3-201ENST00000514909 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 IGHA1P01876 353 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 APPP05067 770 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 AMPD2Q01433 879 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 CFAP100Q494V2 611 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 CDH24Q86UP0 819 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 OR2W6PQ8NHA6 318 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 TSR2Q969E8 191 aaKnown RBP10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 PSMD1Q99460 953 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 ZFYVE21Q9BQ24 234 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 IFT22Q9H7X7 185 aa10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 APOBEC2Q9Y235 224 aaKnown RBP10.27□□□□□ -0.77
LDHBP3-201ENST00000514909 E2F8A0AVK6 867 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 BLACEA4D250 179 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 APBA3O96018 575 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 ITIH2P19823 946 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 KCNJ6P48051 423 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 TESK1Q15569 626 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 CDCA2Q69YH5 1023 aaPredicted RBP10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 ZCCHC8Q6NZY4 707 aaKnown RBP10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 Q6ZS46 218 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 LHFPL2Q6ZUX7 228 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 USP7Q93009 1102 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 CAMKK2Q96RR4 588 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 YIPF2Q9BWQ6 316 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 PRDM10Q9NQV6 1147 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 SPEF1Q9Y4P9 236 aa10.26□□□□□ -0.77
LDHBP3-201ENST00000514909 CYP7A1P22680 504 aa10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 CYP4F3Q08477 520 aa10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 PPP2R5DQ14738 602 aa10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 RSPO2Q6UXX9 243 aaPredicted RBP10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 EZH1Q92800 747 aaPredicted RBP10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 SEMA6CQ9H3T2 930 aa10.25□□□□□ -0.77
LDHBP3-201ENST00000514909 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 PIK3R2O00459 728 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 SIGLEC6O43699 453 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 PREPP48147 710 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 TRIM28Q13263 835 aaKnown RBP10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 ACBD5Q5T8D3 534 aaPredicted RBP10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 KREMEN2Q8NCW0 462 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 CEP41Q9BYV8 373 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 GPR55Q9Y2T6 319 aaPredicted RBP10.24□□□□□ -0.77
LDHBP3-201ENST00000514909 CRTAMO95727 393 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 SCGB1D2O95969 90 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 RAB6AP20340 208 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 SNW1Q13573 536 aaKnown RBP10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 HLTFQ14527 1009 aaKnown RBP eCLIP10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 USP53Q70EK8 1073 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 CHMP4CQ96CF2 233 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 MTMR8Q96EF0 704 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 ZDHHC15Q96MV8 337 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 MYH16Q9H6N6 1097 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 RNF112Q9ULX5 631 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 ASXL2Q76L83 1435 aa10.23□□□□□ -0.77
LDHBP3-201ENST00000514909 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 AKAP10O43572 662 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 GNALP38405 381 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 ECI1P42126 302 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 USP11P51784 963 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 ITKQ08881 620 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 PIN1Q13526 163 aaPredicted RBP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 PRSS53Q2L4Q9 553 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 DENND5AQ6IQ26 1287 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 DDX53Q86TM3 631 aaKnown RBP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 WDR75Q8IWA0 830 aaKnown RBP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 AGGF1Q8N302 714 aaeCLIP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 COPS5Q92905 334 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 DSCC1Q9BVC3 393 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 CDH19Q9H159 772 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 RRAGCQ9HB90 399 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 TRAF6Q9Y4K3 522 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 NPFFR2Q9Y5X5 522 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 ST14Q9Y5Y6 855 aa10.22□□□□□ -0.77
LDHBP3-201ENST00000514909 NEMP1O14524 444 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 GNB5O14775 395 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 EIF5BO60841 1220 aaKnown RBP10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 PEX14O75381 377 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 ITGB2P05107 769 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 KCNA6P17658 529 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 RAB27AP51159 221 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 SCNN1BP51168 640 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 POU4F1Q01851 419 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 PIK3R6Q5UE93 754 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.77
LDHBP3-201ENST00000514909 SEZ6L2Q6UXD5 910 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms