RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PRPHP41219 470 aa17■□□□□ 0.31
VCAN-211ENST00000513984 SARSP49591 514 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 ZNF75DP51815 510 aa17■□□□□ 0.31
VCAN-211ENST00000513984 ADCY7P51828 1080 aa17■□□□□ 0.31
VCAN-211ENST00000513984 ORC2Q13416 577 aaPredicted RBP17■□□□□ 0.31
VCAN-211ENST00000513984 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 SLFN13Q68D06 897 aa17■□□□□ 0.31
VCAN-211ENST00000513984 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17■□□□□ 0.31
VCAN-211ENST00000513984 COA7Q96BR5 231 aa17■□□□□ 0.31
VCAN-211ENST00000513984 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
VCAN-211ENST00000513984 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.31
VCAN-211ENST00000513984 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
VCAN-211ENST00000513984 GH2P01242 217 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 SLC1A4P43007 532 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 MMP14P50281 582 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 JAG1P78504 1218 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 SH3RF1Q7Z6J0 888 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 FAM83AQ86UY5 434 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 DHX58Q96C10 678 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 TRIM5Q9C035 493 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
VCAN-211ENST00000513984 USP17L10C9JJH3 530 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 IKBKBO14920 756 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
VCAN-211ENST00000513984 SLC16A2P36021 539 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
VCAN-211ENST00000513984 TRIML1Q8N9V2 468 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 TMEM60Q9H2L4 133 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 RIC8AQ9NPQ8 531 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 TBC1D12O60347 775 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 CDC25BP30305 580 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 E2F4Q16254 413 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
VCAN-211ENST00000513984 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 F5H6K3 240 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 MYO1BO43795 1136 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 KLRC3Q07444 240 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 NCAPHQ15003 741 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 TNIP1Q15025 636 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 TBCKQ8TEA7 893 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
VCAN-211ENST00000513984 BIN2Q9UBW5 565 aaPredicted RBP16.97■□□□□ 0.31
VCAN-211ENST00000513984 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.31
VCAN-211ENST00000513984 GOLGA6L6A8MZA4 724 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 WNT10BO00744 389 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 NDUFB10O96000 172 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 TPM3P06753 285 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 BMP6P22004 513 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
VCAN-211ENST00000513984 MORC3Q14149 939 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 LETM2Q2VYF4 491 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 JAKMIP3Q5VZ66 844 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 ISM2Q6H9L7 571 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 IQUBQ8NA54 791 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 PAGE5Q96GU1 130 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 MRFAP1L1Q96HT8 127 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.31
VCAN-211ENST00000513984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
VCAN-211ENST00000513984 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.3
VCAN-211ENST00000513984 TXLNAP40222 546 aa16.96■□□□□ 0.3
VCAN-211ENST00000513984 QRICH1Q2TAL8 776 aa16.96■□□□□ 0.3
VCAN-211ENST00000513984 CUL5Q93034 780 aa16.96■□□□□ 0.3
VCAN-211ENST00000513984 MYOZ2Q9NPC6 264 aa16.96■□□□□ 0.3
VCAN-211ENST00000513984 TMEM260Q9NX78 707 aa16.96■□□□□ 0.3
VCAN-211ENST00000513984 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.3
VCAN-211ENST00000513984 RAD21O60216 631 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 NEMFO60524 1076 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 CCNT1O60563 726 aaKnown RBP16.95■□□□□ 0.3
VCAN-211ENST00000513984 SMC2O95347 1197 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 OR52Z1P0C646 297 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
VCAN-211ENST00000513984 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 TMEM39BQ9GZU3 492 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 GLT8D2Q9H1C3 349 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
VCAN-211ENST00000513984 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 ZNF500O60304 480 aaPredicted RBP16.94■□□□□ 0.3
VCAN-211ENST00000513984 PTGER2P43116 358 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
VCAN-211ENST00000513984 TPM4P67936 248 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 MAP3K10Q02779 954 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 DPYDQ12882 1025 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
VCAN-211ENST00000513984 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 CCSER1Q9C0I3 900 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
VCAN-211ENST00000513984 BMP3P12645 472 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms