RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ANO2Q9NQ90 1003 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 ANKRD50Q9ULJ7 1429 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 YBX2Q9Y2T7 364 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 NRXN3Q9Y4C0 1643 aa5.61□□□□□ -1.51
PDLIM5-218ENST00000513341 RGPD1P0DJD0 1748 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 NALCNQ8IZF0 1738 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 NWD2Q9ULI1 1742 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 IQGAP3Q86VI3 1631 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 ADGRL2O95490 1459 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 PXDNQ92626 1479 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 HFM1A2PYH4 1435 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 PRAG1Q86YV5 1406 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 NINLQ9Y2I6 1382 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 SPATA31A3Q5VYP0 1347 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 FITM1A5D6W6 292 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 KCNQ2O43526 872 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 GAB4Q2WGN9 574 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 ZNF326Q5BKZ1 582 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 LETMD1Q6P1Q0 360 aa5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 INTS4Q96HW7 963 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-218ENST00000513341 HRKO00198 91 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 GPR182O15218 404 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 EZH2Q15910 746 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 FAM196AQ6ZSG2 479 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 ZNF605Q86T29 641 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 GRIN3AQ8TCU5 1115 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 DMRTB1Q96MA1 342 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 BCO2Q9BYV7 579 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 CEP44Q9C0F1 390 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 NIF3L1Q9GZT8 377 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 FBRSQ9HAH7 460 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 NLRP2Q9NX02 1062 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 PPP1R1BQ9UD71 204 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 PCDHA4Q9UN74 947 aa5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-218ENST00000513341 E9PCH4 1651 aa5.59□□□□□ -1.52
PDLIM5-218ENST00000513341 ENC1O14682 589 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 ZGLP1P0C6A0 271 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 EFEMP1Q12805 493 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 ZXDCQ2QGD7 858 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 SPATS1Q496A3 300 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 LLGL2Q6P1M3 1020 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 KRT28Q7Z3Y7 464 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 HID1Q8IV36 788 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 GLYCTKQ8IVS8 523 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 RIN3Q8TB24 985 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 DACT3Q96B18 629 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 PPM1HQ9ULR3 514 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 CYP8B1Q9UNU6 501 aa5.58□□□□□ -1.52
PDLIM5-218ENST00000513341 VPS8Q8N3P4 1428 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 ROBO2Q9HCK4 1378 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 RPGRIP1LQ68CZ1 1315 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 FAM83GA6ND36 823 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 OTOL1A6NHN0 477 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 CBX7O95931 251 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 TRHRP34981 398 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 TMEM132EQ6IEE7 984 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 DHX38Q92620 1227 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 TEPSINQ96N21 525 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 DUSP15Q9H1R2 295 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 AKAP2Q9Y2D5 859 aa5.57□□□□□ -1.52
PDLIM5-218ENST00000513341 CHD4Q14839 1912 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 USP32Q8NFA0 1604 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 H3BRB1 525 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 SSPNQ14714 243 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 NKG7Q16617 165 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 HDXQ7Z353 690 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 CREG2Q8IUH2 290 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 SPPL2CQ8IUH8 684 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 SIGLEC10Q96LC7 697 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 TRIT1Q9H3H1 467 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 TUT1Q9H6E5 874 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 SNCAIPQ9Y6H5 919 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 CCDC144AA2RUR9 1427 aa5.56□□□□□ -1.52
PDLIM5-218ENST00000513341 NUP155O75694 1391 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 CDC42BPGQ6DT37 1551 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 CHRNEQ04844 493 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 INPP5AQ14642 412 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 LRFN4Q6PJG9 635 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 GPR62Q9BZJ7 368 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 BTG4Q9NY30 223 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 TACC3Q9Y6A5 838 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 SBNO1A3KN83 1393 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 ARHGEF10O15013 1369 aa5.55□□□□□ -1.52
PDLIM5-218ENST00000513341 SPATA31A5Q5VU36 1347 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 SPATA31A7Q8IWB4 1347 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 PLCH1Q4KWH8 1693 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 SLC22A31A6NKX4 558 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 PLSCR1O15162 318 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 TPP2P29144 1249 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 ETV3P41162 512 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 TIGD5Q53EQ6 642 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 RBCK1Q9BYM8 510 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms