RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 TEX13BQ9BXU2 312 aa24.45■■□□□ 1.5
NEIL3-202ENST00000513321 PLEKHA8P1O95397 391 aa24.44■■□□□ 1.5
NEIL3-202ENST00000513321 MAPK4P31152 587 aa24.44■■□□□ 1.5
NEIL3-202ENST00000513321 METAP2P50579 478 aaKnown RBP eCLIP24.44■■□□□ 1.5
NEIL3-202ENST00000513321 ARHGEF6Q15052 776 aa24.44■■□□□ 1.5
NEIL3-202ENST00000513321 CMTR1Q8N1G2 835 aaKnown RBP24.44■■□□□ 1.5
NEIL3-202ENST00000513321 ZNF274Q96GC6 653 aaPredicted RBP24.44■■□□□ 1.5
NEIL3-202ENST00000513321 AGBL1Q96MI9 1066 aa24.44■■□□□ 1.5
NEIL3-202ENST00000513321 RIOX1Q9H6W3 641 aa24.44■■□□□ 1.5
NEIL3-202ENST00000513321 A0A0G2JMZ2 1700 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 CYTH3O43739 400 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 SLC25A27O95847 323 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 ERCC3P19447 782 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 RABEP1Q15276 862 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 WDR78Q5VTH9 848 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 NCAPG2Q86XI2 1143 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 SRBD1Q8N5C6 995 aaKnown RBP24.43■■□□□ 1.5
NEIL3-202ENST00000513321 SHCBP1Q8NEM2 672 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 FAM217BQ9NTX9 383 aaPredicted RBP24.43■■□□□ 1.5
NEIL3-202ENST00000513321 RBM28Q9NW13 759 aaKnown RBP24.43■■□□□ 1.5
NEIL3-202ENST00000513321 RIPK3Q9Y572 518 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 CASP8AP2Q9UKL3 1982 aa24.43■■□□□ 1.5
NEIL3-202ENST00000513321 TNPO2O14787 897 aaKnown RBP24.42■■□□□ 1.5
NEIL3-202ENST00000513321 SMARCA1P28370 1054 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 CDC27P30260 824 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 PPP2R5BQ15173 497 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 CDC37Q16543 378 aaPredicted RBP24.42■■□□□ 1.5
NEIL3-202ENST00000513321 TMTC3Q6ZXV5 915 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 MROH8Q9H579 483 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 TPCN1Q9ULQ1 816 aa24.42■■□□□ 1.5
NEIL3-202ENST00000513321 ICAM1P05362 532 aa24.41■■□□□ 1.5
NEIL3-202ENST00000513321 ADD1P35611 737 aaKnown RBP24.41■■□□□ 1.5
NEIL3-202ENST00000513321 CCDC82Q8N4S0 544 aa24.41■■□□□ 1.5
NEIL3-202ENST00000513321 MTMR8Q96EF0 704 aa24.41■■□□□ 1.5
NEIL3-202ENST00000513321 SPZ1Q9BXG8 430 aa24.41■■□□□ 1.5
NEIL3-202ENST00000513321 CWC22Q9HCG8 908 aaKnown RBP24.41■■□□□ 1.5
NEIL3-202ENST00000513321 CCDC196A0A1B0GTZ2 297 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 CCT2P78371 535 aaKnown RBP24.4■■□□□ 1.5
NEIL3-202ENST00000513321 QRICH1Q2TAL8 776 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 NOL8Q76FK4 1167 aaKnown RBP24.4■■□□□ 1.5
NEIL3-202ENST00000513321 GPR142Q7Z601 462 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 PLEKHH3Q7Z736 793 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 COA7Q96BR5 231 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 CCPG1Q9ULG6 757 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 TRIM17Q9Y577 477 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 COL11A1P12107 1806 aaPredicted RBP24.4■■□□□ 1.5
NEIL3-202ENST00000513321 GNRH1P01148 92 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 COPB2P35606 906 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 STK3Q13188 491 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 OTOP1Q7RTM1 612 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 HOMER1Q86YM7 354 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 PIBF1Q8WXW3 757 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 PIGSQ96S52 555 aa24.4■■□□□ 1.5
NEIL3-202ENST00000513321 ZBTB5O15062 677 aa24.39■■□□□ 1.49
NEIL3-202ENST00000513321 ALAS1P13196 640 aa24.39■■□□□ 1.49
NEIL3-202ENST00000513321 HOXD10P28358 340 aa24.39■■□□□ 1.49
NEIL3-202ENST00000513321 NCOA5Q9HCD5 579 aaKnown RBP24.39■■□□□ 1.49
NEIL3-202ENST00000513321 HOMER2Q9NSB8 354 aa24.39■■□□□ 1.49
NEIL3-202ENST00000513321 PNMA2Q9UL42 364 aa24.39■■□□□ 1.49
NEIL3-202ENST00000513321 NID2Q14112 1375 aa24.38■■□□□ 1.49
NEIL3-202ENST00000513321 TAL1P17542 331 aaPredicted RBP24.38■■□□□ 1.49
NEIL3-202ENST00000513321 TKFCQ3LXA3 575 aa24.38■■□□□ 1.49
NEIL3-202ENST00000513321 CTU1Q7Z7A3 348 aaKnown RBP24.38■■□□□ 1.49
NEIL3-202ENST00000513321 RRP36Q96EU6 259 aaKnown RBP24.38■■□□□ 1.49
NEIL3-202ENST00000513321 TRERF1Q96PN7 1200 aa24.38■■□□□ 1.49
NEIL3-202ENST00000513321 IVNS1ABPQ9Y6Y0 642 aa24.38■■□□□ 1.49
NEIL3-202ENST00000513321 PNMA6FA0A0J9YX94 578 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 PTPREP23469 700 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 FUT2Q10981 343 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 FBXO11Q86XK2 927 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 CHST13Q8NET6 341 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 SRRDQ9UH36 339 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 GJD2Q9UKL4 321 aa24.37■■□□□ 1.49
NEIL3-202ENST00000513321 STRNO43815 780 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 USH1GQ495M9 461 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 AMNQ9BXJ7 453 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
NEIL3-202ENST00000513321 RNF146Q9NTX7 359 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 GABRQQ9UN88 632 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 ZSWIM8A7E2V4 1837 aa24.36■■□□□ 1.49
NEIL3-202ENST00000513321 PFKFB2O60825 505 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 PPP1R11O60927 126 aaPredicted RBP24.35■■□□□ 1.49
NEIL3-202ENST00000513321 FCER1AP12319 257 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 ME3Q16798 604 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 FBXO40Q9UH90 709 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 LIMCH1Q9UPQ0 1083 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 V9GY48 417 aaPredicted RBP24.35■■□□□ 1.49
NEIL3-202ENST00000513321 BAZ2BQ9UIF8 2168 aaKnown RBP24.35■■□□□ 1.49
NEIL3-202ENST00000513321 hCG_1642624A0A1W2PR95 340 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 SLC15A5A6NIM6 579 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 ST18O60284 1047 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 FLT3LGP49771 235 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 PRKCZQ05513 592 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 MUM1L1Q5H9M0 696 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 MORN1Q5T089 497 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 NUDT12Q9BQG2 462 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 ACAD9Q9H845 621 aa24.35■■□□□ 1.49
NEIL3-202ENST00000513321 SEC63Q9UGP8 760 aaKnown RBP24.35■■□□□ 1.49
NEIL3-202ENST00000513321 LARGE1O95461 756 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms