RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 RXRAP19793 462 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 GJA8P48165 433 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 GCLCP48506 637 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 ICA1Q05084 483 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 FAM43AQ8N2R8 423 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 ZNF396Q96N95 335 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 RNF208Q9H0X6 261 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-228ENST00000511676 AS3MTQ9HBK9 375 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 KLRF2D3W0D1 207 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 MMP1P03956 469 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 PDHBP11177 359 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 SCG2P13521 617 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 OSBPP22059 807 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 CALML3P27482 149 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 GJA5P36382 358 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 CAP2P40123 477 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 TRAF1Q13077 416 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 PFKFB3Q16875 520 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-228ENST00000511676 PPP1R18Q6NYC8 613 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
NR1I3-228ENST00000511676 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-228ENST00000511676 PHKBQ93100 1093 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 ZKSCAN4Q969J2 545 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-228ENST00000511676 BRMS1Q9HCU9 246 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 SNCAIPQ9Y6H5 919 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 MYPNQ86TC9 1320 aa10.49□□□□□ -0.73
NR1I3-228ENST00000511676 KIAA0100Q14667 2235 aaKnown RBP10.49□□□□□ -0.73
NR1I3-228ENST00000511676 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
NR1I3-228ENST00000511676 PLA2G6O60733 806 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 IRF5Q13568 498 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 PKN1Q16512 942 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 KLHL40Q2TBA0 621 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 KRT40Q6A162 431 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 MIGA2Q7L4E1 593 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 CCAR1Q8IX12 1150 aaKnown RBP10.48□□□□□ -0.73
NR1I3-228ENST00000511676 CCDC144CPQ8IYA2 1237 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 DAGLBQ8NCG7 672 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
NR1I3-228ENST00000511676 RIOX1Q9H6W3 641 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 FZD1Q9UP38 647 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 TMX2Q9Y320 296 aa10.48□□□□□ -0.73
NR1I3-228ENST00000511676 TNRC18O15417 2968 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-228ENST00000511676 ESYT2A0FGR8 921 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 EVI5O60447 810 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 YEATS4O95619 227 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 GH2P01242 217 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 TFRCP02786 760 aaKnown RBP10.47□□□□□ -0.73
NR1I3-228ENST00000511676 SEPT2Q15019 361 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 MCTP1Q6DN14 999 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
NR1I3-228ENST00000511676 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 POLR3EQ9NVU0 708 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
NR1I3-228ENST00000511676 ZHX2Q9Y6X8 837 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 V9GY48 417 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-228ENST00000511676 SSC5DA1L4H1 1573 aa10.47□□□□□ -0.73
NR1I3-228ENST00000511676 A0A0G2JLL6 359 aaPredicted RBP10.46□□□□□ -0.73
NR1I3-228ENST00000511676 PHF20L1A8MW92 1017 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 TNPO2O14787 897 aaKnown RBP10.46□□□□□ -0.73
NR1I3-228ENST00000511676 SGPL1O95470 568 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 BMP15O95972 392 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
NR1I3-228ENST00000511676 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
NR1I3-228ENST00000511676 TRAPPC10P48553 1259 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 UBE2HP62256 183 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 RILPL1Q5EBL4 403 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 GPR153Q6NV75 609 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 NECAB2Q7Z6G3 386 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 PRRT2Q7Z6L0 340 aaPredicted RBP10.46□□□□□ -0.73
NR1I3-228ENST00000511676 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 LPAR1Q92633 364 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 BARHL2Q9NY43 387 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
NR1I3-228ENST00000511676 RBBP6Q7Z6E9 1792 aaKnown RBP10.46□□□□□ -0.74
NR1I3-228ENST00000511676 ADCY3O60266 1144 aa10.45□□□□□ -0.74
NR1I3-228ENST00000511676 TRAK2O60296 914 aa10.45□□□□□ -0.74
NR1I3-228ENST00000511676 CCL5P13501 91 aa10.45□□□□□ -0.74
NR1I3-228ENST00000511676 SLC1A4P43007 532 aa10.45□□□□□ -0.74
NR1I3-228ENST00000511676 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms