RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TNPO3Q9Y5L0 923 aaKnown RBP7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 NPFFR2Q9Y5X5 522 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 ST14Q9Y5Y6 855 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 CNTNAP4Q9C0A0 1308 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 PHLDB1Q86UU1 1377 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 TCRBV16S1A1N1A0A5B0 115 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 AQP7O14520 342 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 WIPF1O43516 503 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 LRRN2O75325 713 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 GSNP06396 782 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 SNRPB2P08579 225 aaKnown RBP7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 BMP3P12645 472 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 IREB2P48200 963 aaKnown RBP7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 KIF18BQ86Y91 864 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 UBR7Q8N806 425 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 JDP2Q8WYK2 163 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 ZFYVE21Q9BQ24 234 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 PRDM5Q9NQX1 630 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 CHST7Q9NS84 486 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 WASHC2CQ9Y4E1 1318 aa7.49□□□□□ -1.21
HMGB1P47-201ENST00000511281 PRAMEF1O95521 474 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 SRFP11831 508 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 COL8A1P27658 744 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 POU4F1Q01851 419 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 NMIQ13287 307 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 PPP2R5DQ14738 602 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 HSP90AB2PQ58FF8 381 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 SFRP5Q5T4F7 317 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 PKN3Q6P5Z2 889 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 STRA8Q7Z7C7 330 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 DAGLBQ8NCG7 672 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 NPLOC4Q8TAT6 608 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 GATA6Q92908 595 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 MAGEB10Q96LZ2 347 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 HDAC8Q9BY41 377 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 FAN1Q9Y2M0 1017 aa7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 GPR55Q9Y2T6 319 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P47-201ENST00000511281 H0Y8X5 98 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 BRINP1O60477 761 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 APBA3O96018 575 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 FLT3P36888 993 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 CTSKP43235 329 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 EVA1CP58658 441 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 ZNF460Q14592 562 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 PCBP1Q15365 356 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 RNF219Q5W0B1 726 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 PAOXQ6QHF9 649 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 TXNRD3Q86VQ6 643 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 ZNF655Q8N720 491 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 MEGF10Q96KG7 1140 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 ZDHHC15Q96MV8 337 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
HMGB1P47-201ENST00000511281 ASXL2Q76L83 1435 aa7.46□□□□□ -1.21
HMGB1P47-201ENST00000511281 BLACEA4D250 179 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 AURKAO14965 403 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 GPR39O43194 453 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 OPA1O60313 960 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 LEFTY1O75610 366 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 BPIP17213 487 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 BMP8BP34820 402 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 KCNJ6P48051 423 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 EPHB1P54762 984 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 E4F1Q66K89 784 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 OGFOD3Q6PK18 319 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 CLEC10AQ8IUN9 316 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 ATL2Q8NHH9 583 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 LEO1Q8WVC0 666 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 LGR6Q9HBX8 967 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 G3BP2Q9UN86 482 aaKnown RBP7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 CNTNAP5Q8WYK1 1306 aa7.46□□□□□ -1.22
HMGB1P47-201ENST00000511281 ARVCFO00192 962 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 VAMP4O75379 141 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 CRTAMO95727 393 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 KCNA6P17658 529 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 SCRN1Q12765 414 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 PRSS53Q2L4Q9 553 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 RCSD1Q6JBY9 416 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 ZCCHC8Q6NZY4 707 aaKnown RBP7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 FRS2Q8WU20 508 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 RELTQ969Z4 430 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 ZNF775Q96BV0 537 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 FAM83CQ9BQN1 747 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 ASCC2Q9H1I8 757 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 GPR27Q9NS67 375 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 BACE2Q9Y5Z0 518 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms