RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	ZBED4	O75132	1171 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	QRICH1	Q2TAL8	776 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	LBX2	Q6XYB7	198 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	REM2	Q8IYK8	340 aa	Predicted RBP	13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	ZNF713	Q8N859	430 aa	Predicted RBP	13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	RGS22	Q8NE09	1264 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	ATG4C	Q96DT6	458 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	CAPNS2	Q96L46	248 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	PTPN18	Q99952	460 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	ALG1	Q9BT22	464 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	SLC38A10	Q9HBR0	1119 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	MGAM	O43451	1857 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	VWA5A	O00534	786 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	PDIA4	P13667	645 aa	Known RBP	13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	XBP1	P17861	261 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	PDC	P20941	246 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	TM4SF4	P48230	202 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	OAZ1	P54368	228 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	HERVK_113	P62684	666 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	TRAF1	Q13077	416 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	OTUD7B	Q6GQQ9	843 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	FAM177A1	Q8N128	213 aa	Predicted RBP	13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	FAM43A	Q8N2R8	423 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	MB21D1	Q8N884	522 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	AIFM3	Q96NN9	605 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	P2RX7	Q99572	595 aa	Known RBP	13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	AMN	Q9BXJ7	453 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	SH3GLB2	Q9NR46	395 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	PNMA2	Q9UL42	364 aa		13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.81	□□□□□ -0.2
RACK1-223	ENST00000510199	SNAP25	P60880	206 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	KIF23	Q02241	960 aa	Predicted RBP	13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	GRM1	Q13255	1194 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	LARP1B	Q659C4	914 aa	Known RBP	13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	CCDC174	Q6PII3	467 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	FBXO11	Q86XK2	927 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	IFNL1	Q8IU54	200 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	REPS2	Q8NFH8	660 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	C8orf76	Q96K31	380 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	BARHL2	Q9NY43	387 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	ZNF536	O15090	1300 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	PLXNB2	O15031	1838 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	MYH7B	A7E2Y1	1941 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	DOCK3	Q8IZD9	2030 aa		13.8	□□□□□ -0.2
RACK1-223	ENST00000510199	PLXNA1	Q9UIW2	1896 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	STXBP3	O00186	592 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	6e-7	■■□□□ 12.9
RACK1-223	ENST00000510199	ATP2A1	O14983	1001 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	PPP1R11	O60927	126 aa	Predicted RBP	13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	ICAM1	P05362	532 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	SYT1	P21579	422 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	C1QTNF8	P60827	252 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	TRIM29	Q14134	588 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	WWC2	Q6AWC2	1192 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	PPP1R18	Q6NYC8	613 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	HEATR3	Q7Z4Q2	680 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	CCDC148	Q8NFR7	591 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	FBXO18	Q8NFZ0	1043 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.79	□□□□□ -0.2	3e-11	■■■■□ 24.7
RACK1-223	ENST00000510199	COA7	Q96BR5	231 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	ZIC5	Q96T25	663 aa		13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	PARK7	Q99497	189 aa	Known RBP	13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	WDR33	Q9C0J8	1336 aa	Known RBP	13.79	□□□□□ -0.2
RACK1-223	ENST00000510199	AOC2	O75106	756 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	CYP2C8	P10632	490 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	HSPA6	P17066	643 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	DDIT3	P35638	169 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	MAP2K2	P36507	400 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	GCLC	P48506	637 aa	Predicted RBP	13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	NAPA	P54920	295 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	TMEM132B	Q14DG7	1078 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	CPXCR1	Q8N123	301 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	RAVER2	Q9HCJ3	691 aa	Known RBP	13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	VPS54	Q9P1Q0	977 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	ZNF214	Q9UL59	606 aa	Predicted RBP	13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	CCPG1	Q9ULG6	757 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	RABGAP1	Q9Y3P9	1069 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	PCDHA1	Q9Y5I3	950 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	ABCB11	O95342	1321 aa		13.78	□□□□□ -0.2
RACK1-223	ENST00000510199	ESYT2	A0FGR8	921 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199		H3BQV1	296 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	STX6	O43752	255 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	ALDH1A1	P00352	501 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	LCT	P09848	1927 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	VEGFB	P49765	207 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	FOSB	P53539	338 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	HTRA3	P83110	453 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	USH1G	Q495M9	461 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	IFFO2	Q5TF58	517 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	KRT40	Q6A162	431 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	TYW1B	Q6NUM6	668 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	POTEE	Q6S8J3	1075 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	SHISA4	Q96DD7	197 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	AGBL1	Q96MI9	1066 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	PHF20	Q9BVI0	1012 aa		13.77	□□□□□ -0.21
RACK1-223	ENST00000510199	TEX13B	Q9BXU2	312 aa		13.77	□□□□□ -0.21

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