RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 EBF1Q9UH73 591 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 SUGT1Q9Y2Z0 365 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 PAPLNO95428 1278 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 JUNBP17275 347 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 NOP2P46087 812 aaKnown RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 SLC10A6Q3KNW5 377 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 CRACR2BQ8N4Y2 399 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 ANKS4BQ8N8V4 417 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 MRGPRX3Q96LB0 322 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 FCRL3Q96P31 734 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 SIRPGQ9P1W8 387 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 PPP1R1BQ9UD71 204 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
TRAPPC11-206ENST00000509857 BIN1O00499 593 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 AFMP43652 599 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 HK2P52789 917 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 NR0B2Q15466 257 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 POMZP3Q6PJE2 187 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 ZPBP2Q6X784 338 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 ST13P5Q8NFI4 369 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 MCMBPQ9BTE3 642 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 ERVK13-1Q9NX77 482 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 NCAPD3P42695 1498 aa10.41□□□□□ -0.74
TRAPPC11-206ENST00000509857 CD3EP07766 207 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 KIR2DL1P43626 348 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 KIR2DL2P43627 348 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 CEBPAP49715 358 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 CHRNEQ04844 493 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 TRIM59Q8IWR1 403 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 OXR1Q8N573 874 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
TRAPPC11-206ENST00000509857 FITM1A5D6W6 292 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 AURKAO14965 403 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 RAC2P15153 192 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 TAL1P17542 331 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 AMPD2Q01433 879 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 RCSD1Q6JBY9 416 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 ZNF227Q86WZ6 799 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 HHIPL1Q96JK4 782 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 CDADC1Q9BWV3 514 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 CCDC113Q9H0I3 377 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 TNFRSF10DQ9UBN6 386 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 ZMYM5Q9UJ78 669 aa10.39□□□□□ -0.75
TRAPPC11-206ENST00000509857 NOP56O00567 594 aaKnown RBP10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 FGF10O15520 208 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 GSTM1P09488 218 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 IFNGR1P15260 489 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 SV2CQ496J9 727 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 LRP10Q7Z4F1 713 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 SPPL2CQ8IUH8 684 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 UBXN4Q92575 508 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 EEA1Q15075 1411 aa10.38□□□□□ -0.75
TRAPPC11-206ENST00000509857 CAPNS1P04632 268 aa10.37□□□□□ -0.75
TRAPPC11-206ENST00000509857 ITGAVP06756 1048 aa10.37□□□□□ -0.75
TRAPPC11-206ENST00000509857 ERVFC1P60507 584 aa10.37□□□□□ -0.75
TRAPPC11-206ENST00000509857 LILRA2Q8N149 483 aa10.37□□□□□ -0.75
TRAPPC11-206ENST00000509857 NOTOA8MTQ0 251 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 FADS2P1A8MWK0 482 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 VAMP4O75379 141 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 KCNH1O95259 989 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 RASGRF1Q13972 1273 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 EEF1DP3Q658K8 133 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 CYP2R1Q6VVX0 501 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 TMEM52Q8NDY8 209 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 MKL1Q969V6 931 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 SGSM3Q96HU1 749 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 DNAJC2Q99543 621 aaKnown RBP10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 LGR4Q9BXB1 951 aa10.36□□□□□ -0.75
TRAPPC11-206ENST00000509857 STXBP3O00186 592 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 PDPK1O15530 556 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 USP2O75604 605 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 RASA3Q14644 834 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 GTF2IRD2BQ6EKJ0 949 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 GTF2IRD2Q86UP8 949 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 KIRREL1Q96J84 757 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 NKX2-4Q9H2Z4 354 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 GPR55Q9Y2T6 319 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 BACE2Q9Y5Z0 518 aa10.35□□□□□ -0.75
TRAPPC11-206ENST00000509857 AGRPO00253 132 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 DPY19L1Q2PZI1 675 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 SLCO6A1Q86UG4 719 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 ZSWIM9Q86XI8 627 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 ABHD4Q8TB40 342 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 COPS5Q92905 334 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 PPP1R14AQ96A00 147 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 PTCHD1Q96NR3 888 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 CYP26B1Q9NR63 512 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
TRAPPC11-206ENST00000509857 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
TRAPPC11-206ENST00000509857 TBX1O43435 398 aa10.33□□□□□ -0.76
TRAPPC11-206ENST00000509857 NRDCO43847 1150 aa10.33□□□□□ -0.76
TRAPPC11-206ENST00000509857 SNX17Q15036 470 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms