RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	CHRNE	Q04844	493 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	DUSP4	Q13115	394 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	GNL2	Q13823	731 aa	Known RBP	6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	PPP2R5E	Q16537	467 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	RTP2	Q5QGT7	225 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	MCF2L2	Q86YR7	1114 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	LILRA2	Q8N149	483 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	OXR1	Q8N573	874 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	ANKS4B	Q8N8V4	417 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	FBXO41	Q8TF61	875 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	BRF1	Q92994	677 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	SHISA4	Q96DD7	197 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	MAP6	Q96JE9	813 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	HHIPL1	Q96JK4	782 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	C19orf44	Q9H6X5	657 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	HECW2	Q9P2P5	1572 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	MRVI1	Q9Y6F6	885 aa		6.63	□□□□□ -1.35
NFKB1-208	ENST00000509165	ERCC6L2	Q5T890	1561 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	CLASP1	Q7Z460	1538 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	SMAD7	O15105	426 aa	Known RBP	6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	EPHX1	P07099	455 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	ITGA4	P13612	1032 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	ETFB	P38117	255 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	ARID5A	Q03989	594 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	SPPL2C	Q8IUH8	684 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	FIBCD1	Q8N539	461 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	FCRL2	Q96LA5	508 aa	Predicted RBP	6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	7e-6	■□□□□ 9.4
NFKB1-208	ENST00000509165	DSCC1	Q9BVC3	393 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	SLC12A9	Q9BXP2	914 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	RNF32	Q9H0A6	362 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	WHRN	Q9P202	907 aa		6.62	□□□□□ -1.35
NFKB1-208	ENST00000509165	IFT140	Q96RY7	1462 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	SSU72P8	A0A1W2PR75	194 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	FADS2P1	A8MWK0	482 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	USP2	O75604	605 aa	Predicted RBP	6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	KIR2DL1	P43626	348 aa	Predicted RBP	6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	KIR2DL2	P43627	348 aa	Predicted RBP	6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	MESP2	Q0VG99	397 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	TCEAL1	Q15170	157 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	NOL9	Q5SY16	702 aa	Known RBP	6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	VHLL	Q6RSH7	139 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	TMEM52	Q8NDY8	209 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	SYTL4	Q96C24	671 aa	Predicted RBP	6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	AP5S1	Q9NUS5	200 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	ERVK13-1	Q9NX77	482 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	FAM53C	Q9NYF3	392 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	PRKAG3	Q9UGI9	489 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	ZMYM5	Q9UJ78	669 aa		6.61	□□□□□ -1.35
NFKB1-208	ENST00000509165	PSPN	O60542	156 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	SSB	P05455	408 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	HEATR6	Q6AI08	1181 aa	Known RBP	6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	KIAA1211L	Q6NV74	962 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	PRR23B	Q6ZRT6	265 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	NLRX1	Q86UT6	975 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	FGD4	Q96M96	766 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	NOL6	Q9H6R4	1146 aa	Known RBP	6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	ZNF408	Q9H9D4	720 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	TNFRSF10D	Q9UBN6	386 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	DIS3	Q9Y2L1	958 aa	Known RBP	6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	MROH2B	Q7Z745	1585 aa		6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	AQR	O60306	1485 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
NFKB1-208	ENST00000509165	LRRC10B	A6NIK2	292 aa		6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	NRDC	O43847	1150 aa		6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	ENDOU	P21128	410 aa	Known RBP	6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	DNAJA1	P31689	397 aa	Known RBP	6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	SNX17	Q15036	470 aa		6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	MLANA	Q16655	118 aa		6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	ARHGEF39	Q8N4T4	335 aa		6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	YBX2	Q9Y2T7	364 aa	Known RBP	6.59	□□□□□ -1.35
NFKB1-208	ENST00000509165	TNNI3K	Q59H18	835 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	CWF19L1	Q69YN2	538 aa	Known RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	CEP128	Q6ZU80	1094 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	SLCO6A1	Q86UG4	719 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	ADCY4	Q8NFM4	1077 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	RCC1L	Q96I51	464 aa	Known RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	FCRL3	Q96P31	734 aa	Predicted RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	PLCD4	Q9BRC7	762 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	MCMBP	Q9BTE3	642 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	CDADC1	Q9BWV3	514 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	CWC22	Q9HCG8	908 aa	Known RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	ACTR10	Q9NZ32	417 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	APEX2	Q9UBZ4	518 aa		6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	GPR55	Q9Y2T6	319 aa	Predicted RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	SF3B6	Q9Y3B4	125 aa	Known RBP	6.58	□□□□□ -1.36
NFKB1-208	ENST00000509165	ANKRD34B	A5PLL1	514 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	FGF10	O15520	208 aa	Predicted RBP	6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	GSTM1	P09488	218 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	IFNGR1	P15260	489 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	GALK1	P51570	392 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	ZC3H6	P61129	1189 aa	Known RBP	6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	NCAPH	Q15003	741 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	HSF5	Q4G112	596 aa	Predicted RBP	6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	MPZL3	Q6UWV2	235 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	MICAL1	Q8TDZ2	1067 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	ZDHHC15	Q96MV8	337 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	GBP3	Q9H0R5	595 aa		6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.57	□□□□□ -1.36
NFKB1-208	ENST00000509165	GPR160	Q9UJ42	338 aa		6.57	□□□□□ -1.36

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