RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 CHRNEQ04844 493 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 DUSP4Q13115 394 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
NFKB1-208ENST00000509165 PPP2R5EQ16537 467 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 RTP2Q5QGT7 225 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 MCF2L2Q86YR7 1114 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 LILRA2Q8N149 483 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 OXR1Q8N573 874 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 ANKS4BQ8N8V4 417 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 FBXO41Q8TF61 875 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 BRF1Q92994 677 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 SHISA4Q96DD7 197 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 C19orf44Q9H6X5 657 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 HECW2Q9P2P5 1572 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
NFKB1-208ENST00000509165 ERCC6L2Q5T890 1561 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 CLASP1Q7Z460 1538 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 SMAD7O15105 426 aaKnown RBP6.62□□□□□ -1.35
NFKB1-208ENST00000509165 EPHX1P07099 455 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 ITGA4P13612 1032 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 ETFBP38117 255 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 ARID5AQ03989 594 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 FIBCD1Q8N539 461 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 ZNF513Q8N8E2 541 aaPredicted RBP6.62□□□□□ -1.35
NFKB1-208ENST00000509165 FCRL2Q96LA5 508 aaPredicted RBP6.62□□□□□ -1.35
NFKB1-208ENST00000509165 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.357e-6■□□□□ 9.4
NFKB1-208ENST00000509165 DSCC1Q9BVC3 393 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 SLC12A9Q9BXP2 914 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 WHRNQ9P202 907 aa6.62□□□□□ -1.35
NFKB1-208ENST00000509165 IFT140Q96RY7 1462 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 SSU72P8A0A1W2PR75 194 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 USP2O75604 605 aaPredicted RBP6.61□□□□□ -1.35
NFKB1-208ENST00000509165 KIR2DL1P43626 348 aaPredicted RBP6.61□□□□□ -1.35
NFKB1-208ENST00000509165 KIR2DL2P43627 348 aaPredicted RBP6.61□□□□□ -1.35
NFKB1-208ENST00000509165 MESP2Q0VG99 397 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 TCEAL1Q15170 157 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 NOL9Q5SY16 702 aaKnown RBP6.61□□□□□ -1.35
NFKB1-208ENST00000509165 VHLLQ6RSH7 139 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 SYTL4Q96C24 671 aaPredicted RBP6.61□□□□□ -1.35
NFKB1-208ENST00000509165 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 ERVK13-1Q9NX77 482 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
NFKB1-208ENST00000509165 PSPNO60542 156 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 SSBP05455 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
NFKB1-208ENST00000509165 HEATR6Q6AI08 1181 aaKnown RBP6.6□□□□□ -1.35
NFKB1-208ENST00000509165 KIAA1211LQ6NV74 962 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 NLRX1Q86UT6 975 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 FGD4Q96M96 766 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
NFKB1-208ENST00000509165 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 TNFRSF10DQ9UBN6 386 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 DIS3Q9Y2L1 958 aaKnown RBP6.6□□□□□ -1.35
NFKB1-208ENST00000509165 MROH2BQ7Z745 1585 aa6.6□□□□□ -1.35
NFKB1-208ENST00000509165 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.35
NFKB1-208ENST00000509165 LRRC10BA6NIK2 292 aa6.59□□□□□ -1.35
NFKB1-208ENST00000509165 NRDCO43847 1150 aa6.59□□□□□ -1.35
NFKB1-208ENST00000509165 ENDOUP21128 410 aaKnown RBP6.59□□□□□ -1.35
NFKB1-208ENST00000509165 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
NFKB1-208ENST00000509165 SNX17Q15036 470 aa6.59□□□□□ -1.35
NFKB1-208ENST00000509165 MLANAQ16655 118 aa6.59□□□□□ -1.35
NFKB1-208ENST00000509165 ARHGEF39Q8N4T4 335 aa6.59□□□□□ -1.35
NFKB1-208ENST00000509165 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
NFKB1-208ENST00000509165 TNNI3KQ59H18 835 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 CEP128Q6ZU80 1094 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 ADCY4Q8NFM4 1077 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 RCC1LQ96I51 464 aaKnown RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 FCRL3Q96P31 734 aaPredicted RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 PLCD4Q9BRC7 762 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 MCMBPQ9BTE3 642 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 CDADC1Q9BWV3 514 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 ACTR10Q9NZ32 417 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 APEX2Q9UBZ4 518 aa6.58□□□□□ -1.36
NFKB1-208ENST00000509165 GPR55Q9Y2T6 319 aaPredicted RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 SF3B6Q9Y3B4 125 aaKnown RBP6.58□□□□□ -1.36
NFKB1-208ENST00000509165 ANKRD34BA5PLL1 514 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
NFKB1-208ENST00000509165 GSTM1P09488 218 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 IFNGR1P15260 489 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 GALK1P51570 392 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 ZC3H6P61129 1189 aaKnown RBP6.57□□□□□ -1.36
NFKB1-208ENST00000509165 NCAPHQ15003 741 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 HSF5Q4G112 596 aaPredicted RBP6.57□□□□□ -1.36
NFKB1-208ENST00000509165 MPZL3Q6UWV2 235 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 MICAL1Q8TDZ2 1067 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 ZDHHC15Q96MV8 337 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
NFKB1-208ENST00000509165 CGGBP1Q9UFW8 167 aaPredicted RBP6.57□□□□□ -1.36
NFKB1-208ENST00000509165 GPR160Q9UJ42 338 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms