RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 VTI1BQ9UEU0 232 aa7.95□□□□□ -1.14
TRAPPC13-209ENST00000508304 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-209ENST00000508304 PLEKHN1Q494U1 663 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 TMEM192Q8IY95 271 aa7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 TMEM52Q8NDY8 209 aa7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 GFOD1Q9NXC2 390 aa7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 IMPACTQ9P2X3 320 aa7.94□□□□□ -1.14
TRAPPC13-209ENST00000508304 MEIS1O00470 390 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 VAV1P15498 845 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 EIF4A3P38919 411 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 CRKP46108 304 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 SPATS1Q496A3 300 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 JMJD8Q96S16 334 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 MRS2Q9HD23 443 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 PRR13Q9NZ81 148 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 PCDHB12Q9Y5F1 795 aa7.93□□□□□ -1.14
TRAPPC13-209ENST00000508304 MAPKAPK2P49137 400 aa7.92□□□□□ -1.14
TRAPPC13-209ENST00000508304 CRTC3Q6UUV7 619 aa7.92□□□□□ -1.14
TRAPPC13-209ENST00000508304 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-209ENST00000508304 MKRN2Q9H000 416 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-209ENST00000508304 SLURP1P55000 103 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 TAGLNQ01995 201 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 CLCQ05315 142 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 NR1I3Q14994 352 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 RTP2Q5QGT7 225 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 ZC3H14Q6PJT7 736 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 SLC6A18Q96N87 628 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
TRAPPC13-209ENST00000508304 MEIS3P2A8K0S8 358 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 TNFRSF10CO14798 259 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 PRICKLE3O43900 615 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 NME1P15531 152 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 FBLN1P23142 703 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 LIMS1P48059 325 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 KCNC1P48547 511 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 MVKQ03426 396 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 PLP2Q04941 152 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 AUHQ13825 339 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 RTP5Q14D33 572 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 ZNF296Q8WUU4 475 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 FBXL21Q9UKT6 434 aa7.9□□□□□ -1.14
TRAPPC13-209ENST00000508304 MSL3P1P0C860 447 aa7.89□□□□□ -1.15
TRAPPC13-209ENST00000508304 PFKLP17858 780 aa7.89□□□□□ -1.15
TRAPPC13-209ENST00000508304 VWA3BQ502W6 1294 aa7.89□□□□□ -1.15
TRAPPC13-209ENST00000508304 ZFYVE27Q5T4F4 411 aa7.89□□□□□ -1.15
TRAPPC13-209ENST00000508304 ANTXR1Q9H6X2 564 aa7.89□□□□□ -1.15
TRAPPC13-209ENST00000508304 GSNP06396 782 aa7.88□□□□□ -1.15
TRAPPC13-209ENST00000508304 ZXDCQ2QGD7 858 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-209ENST00000508304 GK5Q6ZS86 529 aa7.88□□□□□ -1.15
TRAPPC13-209ENST00000508304 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 ITGAEP38570 1179 aa7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 TARBP2Q15633 366 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 LRRFIP1Q32MZ4 808 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 SEZ6Q53EL9 994 aa7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 SLC12A9Q9BXP2 914 aa7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
TRAPPC13-209ENST00000508304 SHOXO15266 292 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 CYBBP04839 570 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 DBHP09172 617 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 HLA-DQA1Q5Y7H0 255 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 PAQR3Q6TCH7 311 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 SLC9A7Q96T83 725 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 TMPRSS5Q9H3S3 457 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 ADAMTS1Q9UHI8 967 aa7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 CNOT11Q9UKZ1 510 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-209ENST00000508304 LIPIQ6XZB0 460 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 FNIP1Q8TF40 1166 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 SRRTQ9BXP5 876 aaKnown RBP7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 SUSD2Q9UGT4 822 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 HCFC2Q9Y5Z7 792 aa7.85□□□□□ -1.15
TRAPPC13-209ENST00000508304 A0A1W2PQ27 194 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 A0A1W2PQ64 194 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 A0A1W2PQC6 194 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 A0A1W2PQD8 194 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 GSTM1P09488 218 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 ZNF165P49910 485 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 HTRA3P83110 453 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 FOXO4P98177 505 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 NAT16Q8N8M0 369 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 DSCC1Q9BVC3 393 aa7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 SUCOQ9UBS9 1254 aaKnown RBP7.84□□□□□ -1.15
TRAPPC13-209ENST00000508304 C9IYK1 514 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 ATF2P15336 505 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 MCM4P33991 863 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 APOBRQ0VD83 1088 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 HHIPL2Q6UWX4 724 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 SAPCD2Q86UD0 394 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 LSRQ86X29 649 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 ADGRG2Q8IZP9 1017 aa7.83□□□□□ -1.16
TRAPPC13-209ENST00000508304 A0A1B0GTL3 188 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 SH3D21A4FU49 640 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms