RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PLEKHA8P1O95397 391 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 ICAM1P05362 532 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 CDC27P30260 824 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 MAPK4P31152 587 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 SSRP1Q08945 709 aaKnown RBP23.24■■□□□ 1.31
USP53-203ENST00000507597 TMEM132BQ14DG7 1078 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 FBXO11Q86XK2 927 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 CCDC82Q8N4S0 544 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 SHCBP1Q8NEM2 672 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 GTF3C6Q969F1 213 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 AMNQ9BXJ7 453 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 RNF26Q9BY78 433 aaPredicted RBP23.24■■□□□ 1.31
USP53-203ENST00000507597 MROH8Q9H579 483 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 ADGRA2Q96PE1 1338 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 hCG_1984214I3L0E3 225 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 FKTNO75072 461 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 SCRN1Q12765 414 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 SNRNP48Q6IEG0 339 aaKnown RBP23.23■■□□□ 1.31
USP53-203ENST00000507597 CCDC174Q6PII3 467 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 RIOX2Q8IUF8 465 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 ZNF713Q8N859 430 aaPredicted RBP23.23■■□□□ 1.31
USP53-203ENST00000507597 SNX21Q969T3 373 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 FAM217BQ9NTX9 383 aaPredicted RBP23.23■■□□□ 1.31
USP53-203ENST00000507597 BTBD7Q9P203 1132 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 CCPG1Q9ULG6 757 aa23.23■■□□□ 1.31
USP53-203ENST00000507597 CHST13Q8NET6 341 aa23.22■■□□□ 1.31
USP53-203ENST00000507597 REPS2Q8NFH8 660 aa23.22■■□□□ 1.31
USP53-203ENST00000507597 WASF1Q92558 559 aa23.22■■□□□ 1.31
USP53-203ENST00000507597 LLPHQ9BRT6 129 aaKnown RBP23.22■■□□□ 1.31
USP53-203ENST00000507597 MAF1Q9H063 256 aa23.22■■□□□ 1.31
USP53-203ENST00000507597 NCOA5Q9HCD5 579 aaKnown RBP23.22■■□□□ 1.31
USP53-203ENST00000507597 RAVER2Q9HCJ3 691 aaKnown RBP23.22■■□□□ 1.31
USP53-203ENST00000507597 ZNF214Q9UL59 606 aaPredicted RBP23.22■■□□□ 1.31
USP53-203ENST00000507597 MRPL11Q9Y3B7 192 aaKnown RBP23.22■■□□□ 1.31
USP53-203ENST00000507597 IVNS1ABPQ9Y6Y0 642 aa23.22■■□□□ 1.31
USP53-203ENST00000507597 PRPF3O43395 683 aaKnown RBP23.21■■□□□ 1.31
USP53-203ENST00000507597 HOXD10P28358 340 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 CTCFP49711 727 aaPredicted RBP23.21■■□□□ 1.31
USP53-203ENST00000507597 QRICH1Q2TAL8 776 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 NCAPG2Q86XI2 1143 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 PIGSQ96S52 555 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 CPVLQ9H3G5 476 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 KIF3AQ9Y496 699 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.21■■□□□ 1.31
USP53-203ENST00000507597 ABCB11O95342 1321 aa23.21■■□□□ 1.31
USP53-203ENST00000507597 CYTH3O43739 400 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 STRNO43815 780 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 CNMDO75829 334 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 GNRH1P01148 92 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 XBP1P17861 261 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 FCGRTP55899 365 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 CCDC12Q8WUD4 166 aaPredicted RBP23.2■■□□□ 1.3
USP53-203ENST00000507597 COA7Q96BR5 231 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 TMX3Q96JJ7 454 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 SLC26A6Q9BXS9 759 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 MOV10L1Q9BXT6 1211 aaKnown RBP23.2■■□□□ 1.3
USP53-203ENST00000507597 TXNRD2Q9NNW7 524 aa23.2■■□□□ 1.3
USP53-203ENST00000507597 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
USP53-203ENST00000507597 CNTNAP5Q8WYK1 1306 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 DEXIO95424 95 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 HSPA1AP0DMV8 641 aaKnown RBP23.19■■□□□ 1.3
USP53-203ENST00000507597 HSPA1BP0DMV9 641 aaKnown RBP23.19■■□□□ 1.3
USP53-203ENST00000507597 ALAS1P13196 640 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 HMGN5P82970 282 aaKnown RBP23.19■■□□□ 1.3
USP53-203ENST00000507597 BECN1Q14457 450 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 NTRK3Q16288 839 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 Q3C1V9 767 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 WDR78Q5VTH9 848 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 NBPF11Q86T75 865 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 MCF2L2Q86YR7 1114 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 CMTR1Q8N1G2 835 aaKnown RBP23.19■■□□□ 1.3
USP53-203ENST00000507597 SAMD3Q8N6K7 520 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 PCDHA1Q9Y5I3 950 aa23.19■■□□□ 1.3
USP53-203ENST00000507597 K7ELQ4 463 aaPredicted RBP23.18■■□□□ 1.3
USP53-203ENST00000507597 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
USP53-203ENST00000507597 LACTBP83111 547 aaPredicted RBP23.18■■□□□ 1.3
USP53-203ENST00000507597 TEX2Q8IWB9 1127 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 CCDC83Q8IWF9 413 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 FAM177A1Q8N128 213 aaPredicted RBP23.18■■□□□ 1.3
USP53-203ENST00000507597 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 AGBL1Q96MI9 1066 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 TRERF1Q96PN7 1200 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 ACAD9Q9H845 621 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 SLC5A4Q9NY91 659 aa23.18■■□□□ 1.3
USP53-203ENST00000507597 ZNF536O15090 1300 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 STK36Q9NRP7 1315 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 ERCC3P19447 782 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 SNAP25P60880 206 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 FUT2Q10981 343 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 PLEKHH3Q7Z736 793 aa23.17■■□□□ 1.3
USP53-203ENST00000507597 TNPO2O14787 897 aaKnown RBP23.16■■□□□ 1.3
USP53-203ENST00000507597 FCER1AP12319 257 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 SCG2P13521 617 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms