RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DUOX1Q9NRD9 1551 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 ANKRD65E5RJM6 399 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 PRKAB2O43741 272 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 HNRNPH3P31942 346 aaKnown RBP19.84■□□□□ 0.77
NUP54-205ENST00000507257 GSCP56915 257 aaPredicted RBP19.84■□□□□ 0.77
NUP54-205ENST00000507257 KIF5AQ12840 1032 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 RASGRF1Q13972 1273 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 CATIPQ7Z7H3 387 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 BCAS4Q8TDM0 211 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 SECISBP2LQ93073 1101 aaKnown RBP19.84■□□□□ 0.77
NUP54-205ENST00000507257 DRC1Q96MC2 740 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 MAGEC2Q9UBF1 373 aaPredicted RBP19.84■□□□□ 0.77
NUP54-205ENST00000507257 APBA1Q02410 837 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 TMED8Q6PL24 325 aaPredicted RBP19.84■□□□□ 0.77
NUP54-205ENST00000507257 CNPY4Q8N129 248 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 GDAQ9Y2T3 454 aa19.84■□□□□ 0.77
NUP54-205ENST00000507257 RCCD1A6NED2 376 aa19.83■□□□□ 0.77
NUP54-205ENST00000507257 PSMA7O14818 248 aa19.83■□□□□ 0.77
NUP54-205ENST00000507257 PDE8AO60658 829 aa19.83■□□□□ 0.77
NUP54-205ENST00000507257 TCP1P17987 556 aaKnown RBP19.83■□□□□ 0.77
NUP54-205ENST00000507257 IL17AQ16552 155 aa19.83■□□□□ 0.77
NUP54-205ENST00000507257 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.77
NUP54-205ENST00000507257 ENAHQ8N8S7 591 aaPredicted RBP19.83■□□□□ 0.77
NUP54-205ENST00000507257 DHTKD1Q96HY7 919 aaPredicted RBP19.83■□□□□ 0.77
NUP54-205ENST00000507257 ZSCAN10Q96SZ4 725 aaPredicted RBP19.83■□□□□ 0.77
NUP54-205ENST00000507257 V9GY48 417 aaPredicted RBP19.83■□□□□ 0.77
NUP54-205ENST00000507257 NUTM2BA6NNL0 878 aaPredicted RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 NUTM2EB1AL46 878 aaPredicted RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 COBLO75128 1261 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 RHOBTB3O94955 611 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 FGRP09769 529 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 PPP1R2P41236 205 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 GNGT1P63211 74 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 C2orf54Q08AI8 447 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 TROAPQ12815 778 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 GLE1Q53GS7 698 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 TTI2Q6NXR4 508 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 SND1Q7KZF4 910 aaKnown RBP eCLIP19.82■□□□□ 0.76
NUP54-205ENST00000507257 RPAINQ86UA6 219 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 CCDC155Q8N6L0 562 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 GIMAP8Q8ND71 665 aaPredicted RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 C1orf131Q8NDD1 294 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 KAT2BQ92831 832 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 ZBTB9Q96C00 473 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 ERGIC2Q96RQ1 377 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 CNTNAP5Q8WYK1 1306 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 SRRM3A6NNA2 597 aaPredicted RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 IRS4O14654 1257 aaPredicted RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 USO1O60763 962 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 TACC1O75410 805 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 ZMYND10O75800 440 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 LCA5LO95447 670 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 CERS3Q8IU89 383 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 ANKRD18AQ8IVF6 992 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 FAM114A1Q8IWE2 563 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 GSPT2Q8IYD1 628 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 PRPF38AQ8NAV1 312 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 A1CFQ9NQ94 594 aaKnown RBP19.82■□□□□ 0.76
NUP54-205ENST00000507257 JADE2Q9NQC1 790 aa19.82■□□□□ 0.76
NUP54-205ENST00000507257 RASSF10A6NK89 507 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 ZNF185O15231 689 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 PRDM1O75626 825 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 INPP5BP32019 993 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 STAT6P42226 847 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 YTHDF3Q7Z739 585 aaKnown RBP19.81■□□□□ 0.76
NUP54-205ENST00000507257 ZSCAN29Q8IWY8 852 aaPredicted RBP19.81■□□□□ 0.76
NUP54-205ENST00000507257 C4orf32Q8N8J7 132 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 SPATA4Q8NEY3 305 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 MAGEF1Q9HAY2 307 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 DISC1Q9NRI5 854 aa19.81■□□□□ 0.76
NUP54-205ENST00000507257 KLRC4O43908 158 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 TRIM21P19474 475 aaKnown RBP19.8■□□□□ 0.76
NUP54-205ENST00000507257 HNRNPH1P31943 449 aaKnown RBP19.8■□□□□ 0.76
NUP54-205ENST00000507257 IFIT1BQ5T764 474 aaKnown RBP19.8■□□□□ 0.76
NUP54-205ENST00000507257 TRIM47Q96LD4 638 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 TUBGCP2Q9BSJ2 902 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 GGA2Q9UJY4 613 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 TRIM49BA6NDI0 452 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 FSBPO95073 299 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 LIG3P49916 1009 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 SPA17Q15506 151 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 SYNE4Q8N205 404 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 GDAP1L1Q96MZ0 367 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 TACO1Q9BSH4 297 aaKnown RBP19.8■□□□□ 0.76
NUP54-205ENST00000507257 SH2D4AQ9H788 454 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 AGPAT5Q9NUQ2 364 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 STIM2Q9P246 746 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 HYOU1Q9Y4L1 999 aa19.8■□□□□ 0.76
NUP54-205ENST00000507257 NHSL1Q5SYE7 1610 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 BICDL2A1A5D9 508 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 HSF2BPO75031 334 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 PMS1P54277 932 aaKnown RBP19.79■□□□□ 0.76
NUP54-205ENST00000507257 CHRNA2Q15822 529 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 LRRC1Q9BTT6 524 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 CUEDC2Q9H467 287 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 KBTBD4Q9NVX7 518 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 RNF14Q9UBS8 474 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 DMGDHQ9UI17 866 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms