RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 TEX13AQ9BXU3 409 aaPredicted RBP6.73□□□□□ -1.33
CLDND1-213ENST00000506927 UBE2OQ9C0C9 1292 aaKnown RBP6.73□□□□□ -1.33
CLDND1-213ENST00000506927 ACBD3Q9H3P7 528 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 CWC25Q9NXE8 425 aaPredicted RBP6.73□□□□□ -1.33
CLDND1-213ENST00000506927 CWC15Q9P013 229 aaKnown RBP6.73□□□□□ -1.33
CLDND1-213ENST00000506927 ZFATQ9P243 1243 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 MKL2Q9ULH7 1088 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 KCNMB2Q9Y691 235 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 KIF1AQ12756 1690 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 MST1RQ04912 1400 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 MAP3K15Q6ZN16 1313 aa6.73□□□□□ -1.33
CLDND1-213ENST00000506927 CARMIL3Q8ND23 1372 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 ADAMTS7Q9UKP4 1686 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CCDC196A0A1B0GTZ2 297 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 EFCAB8A8MWE9 144 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 SPTLC2O15270 562 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 XYLBO75191 536 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 SMC2O95347 1197 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 BMP15O95972 392 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CYP21A2P08686 494 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 IFIT1P09914 478 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CPA1P15085 419 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 KCNA6P17658 529 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 XBP1P17861 261 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 MCM3P25205 808 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 ZAP70P43403 619 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 DGKGP49619 791 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 NCBP1Q09161 790 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 SCRN1Q12765 414 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 AIMP1Q12904 312 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 ZMYM1Q5SVZ6 1142 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 TMTC2Q8N394 836 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 TRIML1Q8N9V2 468 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CCDC191Q8NCU4 936 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 NSUN7Q8NE18 718 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 HELQQ8TDG4 1101 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CACTINQ8WUQ7 758 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 ERCC4Q92889 916 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CHAMP1Q96JM3 812 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 PGBD1Q96JS3 809 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 MYD88Q99836 296 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 NAA15Q9BXJ9 866 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 GBP3Q9H0R5 595 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 IL25Q9H293 177 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 NAP1L2Q9ULW6 460 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 PA2G4Q9UQ80 394 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 MARF1Q9Y4F3 1742 aaKnown RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 FER1L4A9Z1Z3 1794 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-213ENST00000506927 MYH15Q9Y2K3 1946 aa6.72□□□□□ -1.33
CLDND1-213ENST00000506927 CAMTA1Q9Y6Y1 1673 aa6.71□□□□□ -1.33
CLDND1-213ENST00000506927 A0A087WZG4 1122 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 E7EWF7 191 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 ZNF213O14771 459 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 ARHGAP6O43182 974 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 EGFRP00533 1210 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 SERPINC1P01008 464 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 PDIA3P30101 505 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 NT5C2P49902 561 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 RCAN1P53805 252 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 TFCP2Q12800 502 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 SART3Q15020 963 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 FMR1NBQ8N0W7 255 aaPredicted RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 MLKLQ8NB16 471 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 ANKRD20A12PQ8NF67 263 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 ENGASEQ8NFI3 743 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 FBXO18Q8NFZ0 1043 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 XAGE3Q8WTP9 111 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 TMEM87BQ96K49 555 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 NEUROD6Q96NK8 337 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 CTAGE1Q96RT6 745 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 SIL1Q9H173 461 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 CNNM2Q9H8M5 875 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 DNAJB12Q9NXW2 375 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 DNAI1Q9UI46 699 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 DBNLQ9UJU6 430 aaKnown RBP6.71□□□□□ -1.34
CLDND1-213ENST00000506927 STARD13Q9Y3M8 1113 aa6.71□□□□□ -1.34
CLDND1-213ENST00000506927 EYA2O00167 538 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 STX10O60499 249 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 CUTAO60888 179 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 ERLIN1O75477 346 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 EIF3JO75822 258 aaKnown RBP6.7□□□□□ -1.34
CLDND1-213ENST00000506927 ZNF202O95125 648 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 MAP3K6O95382 1288 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 IGKV5-2P06315 115 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 RARAP10276 462 aa6.7□□□□□ -1.34
CLDND1-213ENST00000506927 HSPD1P10809 573 aaKnown RBP6.7□□□□□ -1.34
CLDND1-213ENST00000506927 TOP1P11387 765 aaKnown RBP6.7□□□□□ -1.34
CLDND1-213ENST00000506927 CDK11BP21127 795 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms