RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 CCDC170Q8IYT3 715 aa17.81■□□□□ 0.44
SH3TC1-210ENST00000506360 USP28Q96RU2 1077 aa17.81■□□□□ 0.44
SH3TC1-210ENST00000506360 MED23Q9ULK4 1368 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 PFKFB2O60825 505 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 POLGP54098 1239 aaPredicted RBP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 POLR2FP61218 127 aaKnown RBP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 DESI2Q9BSY9 194 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 SLC39A2Q9NP94 309 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 TMEM232C9JQI7 657 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 PPP4R1Q8TF05 950 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 ANKFY1Q9P2R3 1169 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 HYOU1Q9Y4L1 999 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 RNF40O75150 1001 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 BRD1O95696 1058 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 TROVE2P10155 538 aaKnown RBP eCLIP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 IGBP1P78318 339 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 CCDC13Q8IYE1 715 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 NPC1L1Q9UHC9 1359 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 VPS41P49754 854 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 GPR162Q16538 588 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 MYRIPQ8NFW9 859 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 RPGRIP1Q96KN7 1286 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 EP400NLQ6ZTU2 488 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 PPM1KQ8N3J5 372 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 EAF2Q96CJ1 260 aaPredicted RBP17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 HAUS1Q96CS2 278 aa17.8■□□□□ 0.44
SH3TC1-210ENST00000506360 ZNF827Q17R98 1081 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 WHAMMP3Q1A5X7 153 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 GALNT17Q6IS24 598 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 DPY19L2Q6NUT2 758 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 CAPN12Q6ZSI9 719 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 DCPSQ96C86 337 aaKnown RBP17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 CCPG1Q9ULG6 757 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 A0A1B0GUA9 196 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 LRRIQ4A6NIV6 560 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 RAB3IPQ96QF0 476 aaPredicted RBP17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 RPN1P04843 607 aaKnown RBP17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 ADAM9Q13443 819 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 SH2D4BQ5SQS7 431 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 NXNQ6DKJ4 435 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
SH3TC1-210ENST00000506360 GTPBP6O43824 516 aaPredicted RBP17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PPFIA4O75335 1185 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PLCB4Q15147 1175 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PDZD4Q76G19 769 aaPredicted RBP17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 KRT26Q7Z3Y9 468 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 TMEM63CQ9P1W3 806 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PIK3CAP42336 1068 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 PHLDB2Q86SQ0 1253 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 NME8Q8N427 588 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ARHGAP27Q6ZUM4 889 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ZNF277Q9NRM2 450 aaPredicted RBP17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ADCY9O60503 1353 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ABCB5Q2M3G0 1257 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ADAT2Q7Z6V5 191 aaKnown RBP17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 DPH5Q9H2P9 285 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 NRBP2Q9NSY0 501 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 FGAP02671 866 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 SCYL1Q96KG9 808 aa17.78■□□□□ 0.44
SH3TC1-210ENST00000506360 SYNJ2BP-COX16A0A087WUM0 186 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 KIF3CO14782 793 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 GSPT1P15170 499 aaKnown RBP17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 FAM160B1Q5W0V3 765 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 TAB3Q8N5C8 712 aaPredicted RBP17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 COX16Q9P0S2 106 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 TMOD1P28289 359 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 LARSQ9P2J5 1176 aaKnown RBP17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 BTBD18B2RXH4 712 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 CYP4A11Q02928 519 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 STK38LQ9Y2H1 464 aa17.77■□□□□ 0.44
SH3TC1-210ENST00000506360 ABCC4O15439 1325 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 CMA1P23946 247 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 KAZNQ674X7 775 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 C4orf50Q6ZRC1 276 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 SULF1Q8IWU6 871 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 MIS12Q9H081 205 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 ATP10AO60312 1499 aa17.77■□□□□ 0.43
SH3TC1-210ENST00000506360 USPL1Q5W0Q7 1092 aa17.76■□□□□ 0.43
SH3TC1-210ENST00000506360 METTL14Q9HCE5 456 aaKnown RBP17.76■□□□□ 0.43
SH3TC1-210ENST00000506360 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
SH3TC1-210ENST00000506360 CLNS1AP54105 237 aaKnown RBP17.76■□□□□ 0.43
SH3TC1-210ENST00000506360 ZSWIM6Q9HCJ5 1215 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms