RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RALGPS1Q5JS13 557 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 GTF2IRD2BQ6EKJ0 949 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 WAPLQ7Z5K2 1190 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 GTF2IRD2Q86UP8 949 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 LILRB2Q8N423 598 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 BTN2A2Q8WVV5 523 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 ZNF669Q96BR6 464 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 SPATA9Q9BWV2 254 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 CWC22Q9HCG8 908 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 AP5S1Q9NUS5 200 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 SLAMF8Q9P0V8 285 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 GPR55Q9Y2T6 319 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 TMEM82A0PJX8 343 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 STXBP3O00186 592 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 PPP2R2AP63151 447 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 GRB10Q13322 594 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 SF1Q15637 639 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 SLC23A3Q6PIS1 610 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 CRACR2BQ8N4Y2 399 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 ALPK1Q96QP1 1244 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 CDADC1Q9BWV3 514 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 ADAMTS6Q9UKP5 1117 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 ZNF281Q9Y2X9 895 aa6.11□□□□□ -1.43
TOPBP1-204ENST00000505804 C2orf71A6NGG8 1288 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 AURKAO14965 403 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 CAPNS1P04632 268 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 RNASE1P07998 156 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 HSP90AA2PQ14568 343 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 LRRC47Q8N1G4 583 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 SYTL4Q96C24 671 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 NKX2-4Q9H2Z4 354 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 CYP26B1Q9NR63 512 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 ARHGEF4Q9NR80 690 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 EBF1Q9UH73 591 aa6.1□□□□□ -1.43
TOPBP1-204ENST00000505804 ADCY3O60266 1144 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 HOXC12P31275 282 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 ECI1P42126 302 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 HK2P52789 917 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 SCRN1Q12765 414 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 ABI1Q8IZP0 508 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
TOPBP1-204ENST00000505804 SNRPB2P08579 225 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 ZGLP1P0C6A0 271 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 KCNJ6P48051 423 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 CYP4F3Q08477 520 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 YOD1Q5VVQ6 348 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 TMEM52Q8NDY8 209 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 AARSD1Q9BTE6 412 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 IER2Q9BTL4 223 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 G6PC3Q9BUM1 346 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 KANSL2Q9H9L4 492 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 TMEM59LQ9UK28 342 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 BACE2Q9Y5Z0 518 aa6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 OAS3Q9Y6K5 1087 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-204ENST00000505804 TRAV20A0A0B4J274 112 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 FGF10O15520 208 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 PRODHO43272 600 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 SEPHS1P49903 392 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 PRSS53Q2L4Q9 553 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 FOXB2Q5VYV0 432 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 Q8N3U1 123 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 COPS5Q92905 334 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 CCDC140Q96MF4 163 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 ERVK13-1Q9NX77 482 aa6.07□□□□□ -1.44
TOPBP1-204ENST00000505804 THBDP07204 575 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 PABPC1P11940 636 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 ENDOUP21128 410 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 GFRA1P56159 465 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 ERVFC1P60507 584 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 DUSP4Q13115 394 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 FAM209AQ5JX71 171 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 EEF1DP3Q658K8 133 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 RCSD1Q6JBY9 416 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 NSMFQ6X4W1 530 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 NBPF11Q86T75 865 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 NAT16Q8N8M0 369 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 JMYQ8N9B5 988 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 SH3TC2Q8TF17 1288 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 THAP3Q8WTV1 239 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 FRS2Q8WU20 508 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 MAP6Q96JE9 813 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 HHIPL1Q96JK4 782 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 FCRL2Q96LA5 508 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 RNPC3Q96LT9 517 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 PTCHD1Q96NR3 888 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 CDC6Q99741 560 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms