RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 VEZTQ9HBM0 779 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 GINM1Q9NU53 330 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 WBP1LQ9NX94 342 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PGAP2Q9UHJ9 254 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 FBXO2Q9UK22 296 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PCDHA6Q9UN73 950 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PCDHA8Q9Y5H6 950 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 FRMPD2Q68DX3 1309 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-208ENST00000505728 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 TRAF5O00463 557 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ZBTB5O15062 677 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 GH2P01242 217 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 SLURP2P0DP57 97 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-208ENST00000505728 SLC1A4P43007 532 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ATP2C1P98194 919 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ORC2Q13416 577 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ZNF174Q15697 407 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 CCDC96Q2M329 555 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 DEFB115Q30KQ5 88 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 CST9Q5W186 159 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ARL6IP4Q66PJ3 421 aaKnown RBP9.19□□□□□ -0.94
COL4A5-208ENST00000505728 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 GMCL1Q96IK5 515 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 PPP1R9BQ96SB3 815 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 JMJD4Q9H9V9 463 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 PRDM10Q9NQV6 1147 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 CNOT7Q9UIV1 285 aaKnown RBP9.19□□□□□ -0.94
COL4A5-208ENST00000505728 KCNH3Q9ULD8 1083 aa9.19□□□□□ -0.94
COL4A5-208ENST00000505728 F5H6K3 240 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 GDF11O95390 407 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 HSPA8P11142 646 aaKnown RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 CTCFP49711 727 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 GMPSP49915 693 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 LBX1P52954 281 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 KLRC3Q07444 240 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 PTGDRQ13258 359 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 RRP1BQ14684 758 aaKnown RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 NBPF9Q3BBW0 867 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 RASGRP2Q7LDG7 609 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 HOMER1Q86YM7 354 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 RNF214Q8ND24 703 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 CLIC6Q96NY7 704 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 CPVLQ9H3G5 476 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 GPRC5DQ9NZD1 345 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 KIAA1468Q9P260 1216 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 USP25Q9UHP3 1055 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
COL4A5-208ENST00000505728 TMX2Q9Y320 296 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
COL4A5-208ENST00000505728 CASP8AP2Q9UKL3 1982 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 H7C1D1 291 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 LAD1O00515 517 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 CAP2P40123 477 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 ADCY7P51828 1080 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 MRPL12P52815 198 aaKnown RBP9.17□□□□□ -0.94
COL4A5-208ENST00000505728 TRAF1Q13077 416 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 NONOQ15233 471 aaKnown RBP eCLIP9.17□□□□□ -0.94
COL4A5-208ENST00000505728 STX1AQ16623 288 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
COL4A5-208ENST00000505728 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
COL4A5-208ENST00000505728 KCTD1Q719H9 257 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 TEX2Q8IWB9 1127 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 C4orf32Q8N8J7 132 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 CCDC34Q96HJ3 373 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 PYM1Q9BRP8 204 aaKnown RBP9.17□□□□□ -0.94
COL4A5-208ENST00000505728 TMEM39BQ9GZU3 492 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 CSRNP2Q9H175 543 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 GOPCQ9HD26 462 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 RIC8AQ9NPQ8 531 aa9.17□□□□□ -0.94
COL4A5-208ENST00000505728 SHTN1A0MZ66 631 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 ADAMTS3O15072 1205 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 PLA2G6O60733 806 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 NDUFB10O96000 172 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 ASNSP08243 561 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 BMP3P12645 472 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 SLC16A2P36021 539 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
COL4A5-208ENST00000505728 PRPHP41219 470 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 JAG1P78504 1218 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 RASA3Q14644 834 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 ZRSR1Q15695 479 aaKnown RBP9.16□□□□□ -0.94
COL4A5-208ENST00000505728 INF2Q27J81 1249 aa9.16□□□□□ -0.94
COL4A5-208ENST00000505728 SHROOM1Q2M3G4 852 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms