RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SLC6A17Q9H1V8 727 aa5.86□□□□□ -1.47
LINC01088-202ENST00000505149 SMAD7O15105 426 aaKnown RBP5.85□□□□□ -1.47
LINC01088-202ENST00000505149 FGF10O15520 208 aaPredicted RBP5.85□□□□□ -1.47
LINC01088-202ENST00000505149 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
LINC01088-202ENST00000505149 POU4F1Q01851 419 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 CYP2R1Q6VVX0 501 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 SLCO6A1Q86UG4 719 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 FAM84AQ96KN4 292 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 C8orf37Q96NL8 207 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 C19orf44Q9H6X5 657 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 ACTR10Q9NZ32 417 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 ZMYM5Q9UJ78 669 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 PCDHB10Q9UN67 800 aa5.85□□□□□ -1.47
LINC01088-202ENST00000505149 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-202ENST00000505149 HRKO00198 91 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 MEIS1O00470 390 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 PSPNO60542 156 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 FKTNO75072 461 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 USP2O75604 605 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-202ENST00000505149 TRHRP34981 398 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-202ENST00000505149 ETFBP38117 255 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 RCSD1Q6JBY9 416 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 KIAA1211LQ6NV74 962 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 GALNT18Q6P9A2 607 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 MPZL3Q6UWV2 235 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 ZPBP2Q6X784 338 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 TMEM52Q8NDY8 209 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 BRF1Q92994 677 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 FCRL3Q96P31 734 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-202ENST00000505149 NOL6Q9H6R4 1146 aaKnown RBP5.84□□□□□ -1.47
LINC01088-202ENST00000505149 ZNF408Q9H9D4 720 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 AP5S1Q9NUS5 200 aa5.84□□□□□ -1.47
LINC01088-202ENST00000505149 EFEMP2O95967 443 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 PNLIPP16233 465 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 RTP1P59025 263 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 MLANAQ16655 118 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 HSF5Q4G112 596 aaPredicted RBP5.83□□□□□ -1.48
LINC01088-202ENST00000505149 PRR23BQ6ZRT6 265 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 CEP128Q6ZU80 1094 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 INTS4Q96HW7 963 aaKnown RBP5.83□□□□□ -1.48
LINC01088-202ENST00000505149 CDADC1Q9BWV3 514 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 CGGBP1Q9UFW8 167 aaPredicted RBP5.83□□□□□ -1.48
LINC01088-202ENST00000505149 GPR160Q9UJ42 338 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 ACSL6Q9UKU0 697 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 MRVI1Q9Y6F6 885 aa5.83□□□□□ -1.48
LINC01088-202ENST00000505149 AURKAO14965 403 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 PEX10O60683 326 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 C8AP07357 584 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 YBX3P16989 372 aaKnown RBP eCLIP5.82□□□□□ -1.48
LINC01088-202ENST00000505149 CORO7P57737 925 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 SLC14A2Q15849 920 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 FXNQ16595 210 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 HLA-DQA1Q5Y7H0 255 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 EEF1DP3Q658K8 133 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 POMZP3Q6PJE2 187 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-202ENST00000505149 FBXO15Q8NCQ5 510 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-202ENST00000505149 NLGN2Q8NFZ4 835 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 APBA2Q99767 749 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 EPN3Q9H201 632 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 GPR55Q9Y2T6 319 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-202ENST00000505149 EMC9Q9Y3B6 208 aa5.82□□□□□ -1.48
LINC01088-202ENST00000505149 ARID1BQ8NFD5 2236 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-202ENST00000505149 TSPAN15O95858 294 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 GSTM1P09488 218 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 DNAJA1P31689 397 aaKnown RBP5.81□□□□□ -1.48
LINC01088-202ENST00000505149 ERVFRD-1P60508 538 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 LAPTM5Q13571 262 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 BVESQ8NE79 360 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 PTCHD1Q96NR3 888 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 SLC26A8Q96RN1 970 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 EPB41L4BQ9H329 900 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 ZNF552Q9H707 407 aaPredicted RBP5.81□□□□□ -1.48
LINC01088-202ENST00000505149 TAF6LQ9Y6J9 622 aa5.81□□□□□ -1.48
LINC01088-202ENST00000505149 KLF4O43474 513 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 TBC1D8O95759 1140 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 IFNGR1P15260 489 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 AMPD2Q01433 879 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 NAALADL2Q58DX5 795 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 C6orf15Q6UXA7 325 aaPredicted RBP5.8□□□□□ -1.48
LINC01088-202ENST00000505149 ADAT2Q7Z6V5 191 aaKnown RBP5.8□□□□□ -1.48
LINC01088-202ENST00000505149 MRGPRX3Q96LB0 322 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 FGD4Q96M96 766 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 ZDHHC15Q96MV8 337 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 PLCD4Q9BRC7 762 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 MCMBPQ9BTE3 642 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 NSUN3Q9H649 340 aaKnown RBP5.8□□□□□ -1.48
LINC01088-202ENST00000505149 APEX2Q9UBZ4 518 aa5.8□□□□□ -1.48
LINC01088-202ENST00000505149 TRBV23OR9-2A0A075B6M9 112 aa5.79□□□□□ -1.48
LINC01088-202ENST00000505149 CAPNS1P04632 268 aa5.79□□□□□ -1.48
LINC01088-202ENST00000505149 CD3EP07766 207 aa5.79□□□□□ -1.48
LINC01088-202ENST00000505149 GLDCP23378 1020 aa5.79□□□□□ -1.48
LINC01088-202ENST00000505149 YBX1P67809 324 aaKnown RBP5.79□□□□□ -1.48
LINC01088-202ENST00000505149 ZNF648Q5T619 568 aaPredicted RBP5.79□□□□□ -1.48
LINC01088-202ENST00000505149 KSR1Q8IVT5 923 aa5.79□□□□□ -1.48
LINC01088-202ENST00000505149 TRIM59Q8IWR1 403 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms