RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 ADAMTS5Q9UNA0 930 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 MYH7BA7E2Y1 1941 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 PDHXO00330 501 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 ATP2A1O14983 1001 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 ZBTB5O15062 677 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 DEXIO95424 95 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 HERVK_113P62684 666 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 KIF23Q02241 960 aaPredicted RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 ADGRF4Q8IZF3 695 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 RGS22Q8NE09 1264 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 SMARCC2Q8TAQ2 1214 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
RFC1-210ENST00000505077 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 JMJD4Q9H9V9 463 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 SLC38A10Q9HBR0 1119 aa11.88□□□□□ -0.51
RFC1-210ENST00000505077 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 PTPDC1A2A3K4 754 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 IGF2BP3O00425 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC1-210ENST00000505077 VWA5AO00534 786 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 CYTH3O43739 400 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 ABCB7O75027 752 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 ZBED4O75132 1171 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
RFC1-210ENST00000505077 COPB2P35606 906 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 VEGFBP49765 207 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
RFC1-210ENST00000505077 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
RFC1-210ENST00000505077 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
RFC1-210ENST00000505077 PTPN18Q99952 460 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 MAF1Q9H063 256 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
RFC1-210ENST00000505077 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
RFC1-210ENST00000505077 ADGRA2Q96PE1 1338 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 KIAA1217Q5T5P2 1943 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 ICAM1P05362 532 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 PDCP20941 246 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 SLC16A2P36021 539 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 GRM1Q13255 1194 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
RFC1-210ENST00000505077 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
RFC1-210ENST00000505077 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 SH3GLB2Q9NR46 395 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
RFC1-210ENST00000505077 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 RABGAP1Q9Y3P9 1069 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 MCM3APO60318 1980 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 TCHHQ07283 1943 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
RFC1-210ENST00000505077 CA12O43570 354 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 AOC2O75106 756 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 SCG2P13521 617 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 XBP1P17861 261 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 CCNA1P78396 465 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 FAM110CQ1W6H9 321 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
RFC1-210ENST00000505077 REPS2Q8NFH8 660 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 PHKBQ93100 1093 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 PIGSQ96S52 555 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
RFC1-210ENST00000505077 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 SAGE1Q9NXZ1 904 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
RFC1-210ENST00000505077 MORF4L1Q9UBU8 362 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
RFC1-210ENST00000505077 V9GY48 417 aaPredicted RBP11.85□□□□□ -0.51
RFC1-210ENST00000505077 ABCB11O95342 1321 aa11.85□□□□□ -0.51
RFC1-210ENST00000505077 ESYT2A0FGR8 921 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 CYP2C8P10632 490 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 MAP2K1Q02750 393 aaPredicted RBP11.84□□□□□ -0.51
RFC1-210ENST00000505077 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms