RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CRTC3Q6UUV7 619 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 ZSWIM9Q86XI8 627 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 POU5F2Q8N7G0 328 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 FLAD1Q8NFF5 587 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 ST13P5Q8NFI4 369 aaPredicted RBP4.78□□□□□ -1.64
RFC1-209ENST00000504974 FHOD1Q9Y613 1164 aa4.78□□□□□ -1.64
RFC1-209ENST00000504974 LRRC10BA6NIK2 292 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 H0Y8X5 98 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 FKTNO75072 461 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 KCNH1O95259 989 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 ITGAVP06756 1048 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 ZNF143P52747 638 aaPredicted RBP4.77□□□□□ -1.65
RFC1-209ENST00000504974 DPY19L1Q2PZI1 675 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 GIMAP6Q6P9H5 292 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 LRP10Q7Z4F1 713 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 NOP9Q86U38 636 aaKnown RBP4.77□□□□□ -1.65
RFC1-209ENST00000504974 BVESQ8NE79 360 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 HDAC8Q9BY41 377 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 GPR62Q9BZJ7 368 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 EPN3Q9H201 632 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 C19orf44Q9H6X5 657 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 CGGBP1Q9UFW8 167 aaPredicted RBP4.77□□□□□ -1.65
RFC1-209ENST00000504974 DUSP13Q9UII6 198 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 ZMYM5Q9UJ78 669 aa4.77□□□□□ -1.65
RFC1-209ENST00000504974 SF3B6Q9Y3B4 125 aaKnown RBP4.77□□□□□ -1.65
RFC1-209ENST00000504974 IQCA1LA6NCM1 817 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 TBX1O43435 398 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 SMARCA5O60264 1052 aaPredicted RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 VAMP4O75379 141 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 CD3EP07766 207 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 SYPP08247 313 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 YBX3P16989 372 aaKnown RBP eCLIP4.76□□□□□ -1.65
RFC1-209ENST00000504974 MESP2Q0VG99 397 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 POMZP3Q6PJE2 187 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 TSPYL5Q86VY4 417 aaPredicted RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 ZNF227Q86WZ6 799 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 LRRC47Q8N1G4 583 aaKnown RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 CRACR2BQ8N4Y2 399 aaPredicted RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 SYTL5Q8TDW5 730 aaPredicted RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 TCTN2Q96GX1 697 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 KIRREL1Q96J84 757 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 ALPK1Q96QP1 1244 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 DIRC2Q96SL1 478 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 LMCD1Q9NZU5 365 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 DIS3Q9Y2L1 958 aaKnown RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 TMA7Q9Y2S6 64 aaKnown RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 GPR55Q9Y2T6 319 aaPredicted RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
RFC1-209ENST00000504974 MRPL42Q9Y6G3 142 aaKnown RBP4.76□□□□□ -1.65
RFC1-209ENST00000504974 A0A1W2PQU0 124 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 STXBP3O00186 592 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 SRFP11831 508 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 CTSKP43235 329 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 KCNJ6P48051 423 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 PCBP3P57721 371 aaKnown RBP4.75□□□□□ -1.65
RFC1-209ENST00000504974 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 JAG1P78504 1218 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 AMPD2Q01433 879 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 EGR3Q06889 387 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 TIGD5Q53EQ6 642 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 THAP5Q7Z6K1 395 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 LILRB2Q8N423 598 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 ZNF655Q8N720 491 aaPredicted RBP4.75□□□□□ -1.65
RFC1-209ENST00000504974 DAGLBQ8NCG7 672 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 ENOX1Q8TC92 643 aaKnown RBP4.75□□□□□ -1.65
RFC1-209ENST00000504974 SH3TC2Q8TF17 1288 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 BTN2A2Q8WVV5 523 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 SPATA9Q9BWV2 254 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 FOXP3Q9BZS1 431 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 TCFL5Q9UL49 500 aa4.75□□□□□ -1.65
RFC1-209ENST00000504974 A0A087WZG4 1122 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 LOC105371045A0A1W2PR82 267 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 FARP2O94887 1054 aaPredicted RBP4.74□□□□□ -1.65
RFC1-209ENST00000504974 GSNP06396 782 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 GSTM1P09488 218 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 AFMP43652 599 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 POU4F1Q01851 419 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 FZD5Q13467 585 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 HSP90AA2PQ14568 343 aaPredicted RBP4.74□□□□□ -1.65
RFC1-209ENST00000504974 GAB4Q2WGN9 574 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 TMEM67Q5HYA8 995 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 MPZL3Q6UWV2 235 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 JAZF1Q86VZ6 243 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 TRIM59Q8IWR1 403 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 ARHGEF39Q8N4T4 335 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 ZNF513Q8N8E2 541 aaPredicted RBP4.74□□□□□ -1.65
RFC1-209ENST00000504974 RCC1LQ96I51 464 aaKnown RBP4.74□□□□□ -1.65
RFC1-209ENST00000504974 IPO9Q96P70 1041 aaKnown RBP4.74□□□□□ -1.65
RFC1-209ENST00000504974 CDC6Q99741 560 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 CDADC1Q9BWV3 514 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 PRR13Q9NZ81 148 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 EMC9Q9Y3B6 208 aa4.74□□□□□ -1.65
RFC1-209ENST00000504974 CCDC180Q9P1Z9 1646 aa4.73□□□□□ -1.65
RFC1-209ENST00000504974 EFEMP2O95967 443 aa4.73□□□□□ -1.65
RFC1-209ENST00000504974 GLI1P08151 1106 aa4.73□□□□□ -1.65
RFC1-209ENST00000504974 SNRPB2P08579 225 aaKnown RBP4.73□□□□□ -1.65
RFC1-209ENST00000504974 FAM153BP0C7A2 387 aa4.73□□□□□ -1.65
RFC1-209ENST00000504974 IFNGR1P15260 489 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms