RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TOB1P50616 345 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PTPAQ15257 358 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 TTC38Q5R3I4 469 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PIK3AP1Q6ZUJ8 805 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 FBXO11Q86XK2 927 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 ZNF280CQ8ND82 737 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PGBD1Q96JS3 809 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 C12orf42Q96LP6 360 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 CSADQ9Y600 493 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 FDX1P10109 184 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 BACE1P56817 501 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 PRAMEF18Q5VWM3 479 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 RBM46Q8TBY0 533 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 GLIS2Q9BZE0 524 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 PCDHA7Q9UN72 937 aa13.65□□□□□ -0.22
POLR2J3-210ENST00000504677 CUTAO60888 179 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 MTMR2Q13614 643 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 GSE1Q14687 1217 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 EAPPQ56P03 285 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 KIAA1755Q5JYT7 1200 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 COA7Q96BR5 231 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
POLR2J3-210ENST00000504677 UNCXA6NJT0 531 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 LAD1O00515 517 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 VCAM1P19320 739 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ZNF445P59923 1031 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 SPP2Q13103 211 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ARMC9Q7Z3E5 817 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 PRPF38AQ8NAV1 312 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 FERMT2Q96AC1 680 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 TMOD4Q9NZQ9 345 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 TMEM63CQ9P1W3 806 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 ABCB11O95342 1321 aa13.63□□□□□ -0.23
POLR2J3-210ENST00000504677 PARP14Q460N5 1801 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 POTECB2RU33 542 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 PTPREP23469 700 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 CMA1P23946 247 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 CLK2P49760 499 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 ATP2C1P98194 919 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 VGLL4Q14135 290 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 NEK8Q86SG6 692 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 NUP62CLQ9H1M0 184 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 MRPL11Q9Y3B7 192 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 SRPRBQ9Y5M8 271 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 SNCAIPQ9Y6H5 919 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 MYPNQ86TC9 1320 aa13.62□□□□□ -0.23
POLR2J3-210ENST00000504677 RBBP6Q7Z6E9 1792 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 FAM237AA0A1B0GTK4 181 aa13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 FOSP01100 380 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 LIG1P18858 919 aa13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 ATP2B1P20020 1258 aa13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 PPATQ06203 517 aa13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 ARL6IP4Q66PJ3 421 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-210ENST00000504677 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms