RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CHMP4BP1P59074 171 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 KARSQ15046 597 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 DDB1Q16531 1140 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 KBTBD12Q3ZCT8 623 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PPP1R42Q7Z4L9 355 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SDCCAG8Q86SQ7 713 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ADGRG2Q8IZP9 1017 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PI4KAP1Q8N8J0 262 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 IP6K1Q92551 441 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 CEP295NLQ96MC4 621 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 C2orf49Q9BVC5 232 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 OSBPL10Q9BXB5 764 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 NACAP1Q9BZK3 213 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 POLMQ9NP87 494 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ORC3Q9UBD5 711 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 TBC1D30Q9Y2I9 924 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 USP16Q9Y5T5 823 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 BZW2Q9Y6E2 419 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SIPA1L3O60292 1781 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 TMCO5BA8MYB1 307 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 P4HA2O15460 535 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 RNGTTO60942 597 aaKnown RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 E2F6O75461 281 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 ERLIN2O94905 339 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TRIM37O94972 964 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 KCNQ4P56696 695 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 GBE1Q04446 702 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 BMP2KLQ5H9B9 411 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 METTL24Q5JXM2 366 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TBC1D9BQ66K14 1250 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 CACNA2D4Q7Z3S7 1137 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 GRAMD2AQ8IUY3 354 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 MFN1Q8IWA4 741 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 LINC00469Q8N7U9 141 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 KIAA1958Q8N8K9 716 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 ATP11CQ8NB49 1132 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TTC16Q8NEE8 873 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 OTUD7AQ8TE49 926 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 CTNNBL1Q8WYA6 563 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 MAML3Q96JK9 1138 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC39A3Q9BRY0 314 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 ZBTB3Q9H5J0 574 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 NFE2L3Q9Y4A8 694 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 GON4LQ3T8J9 2241 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 GSTTP1A0A1W2PQM5 241 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 ENPP3O14638 875 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 KCNJ13O60928 360 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 RANBP1P43487 201 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM160A1Q05DH4 1040 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 IFFO1Q0D2I5 559 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 IMMTQ16891 758 aaKnown RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC144BQ3MJ40 725 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC10A5Q5PT55 438 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 LURAP1LQ8IV03 231 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 AOPEPQ8N6M6 819 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TSPYL6Q8N831 410 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 PHOSPHO2Q8TCD6 241 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TRIM11Q96F44 468 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 SCLT1Q96NL6 688 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 TUT1Q9H6E5 874 aaKnown RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 STK32BQ9NY57 414 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 PA2G4Q9UQ80 394 aaKnown RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 WDR37Q9Y2I8 494 aa4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 RPAP1Q9BWH6 1393 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-208ENST00000504220 COL5A3P25940 1745 aaPredicted RBP4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 IFIT3O14879 490 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 HGSO14964 777 aaPredicted RBP4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 PLSCR1O15162 318 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 RGL2O15211 777 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 ZSCAN12O43309 604 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 CSPG5O95196 566 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 RHOXF2BP0C7M4 288 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 PDHBP11177 359 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 RXRAP19793 462 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 CDC25CP30307 473 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 USP8P40818 1118 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 PSMD7P51665 324 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 CDK17Q00537 523 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 FLIIQ13045 1269 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 SPA17Q15506 151 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 TCERG1LQ5VWI1 586 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 ZCCHC8Q6NZY4 707 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 ARHGEF25Q86VW2 580 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 TRIML1Q8N9V2 468 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 SNX27Q96L92 541 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 SERINC2Q96SA4 455 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 RHOXF2Q9BQY4 288 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 PAGR1Q9BTK6 254 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 NUP58Q9BVL2 599 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 DACH1Q9UI36 760 aa4.09□□□□□ -1.76
PCDH11X-208ENST00000504220 A0A087WZG4 1122 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 GOLGA6L7A0A1B0GV03 622 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PALM3A6NDB9 673 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 C19orf81C9J6K1 198 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms