RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TRIM14Q14142 442 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 KCNJ12Q14500 433 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 NONOQ15233 471 aaKnown RBP eCLIP18.67■□□□□ 0.58
VCAN-204ENST00000502527 ADSSL1Q8N142 457 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 WDR24Q96S15 920 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 SEC63Q9UGP8 760 aaKnown RBP18.67■□□□□ 0.58
VCAN-204ENST00000502527 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 ADGRG1Q9Y653 693 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 GAKO14976 1311 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 PP2D1A8MPX8 630 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 EFCAB8A8MWE9 144 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 GYPCP04921 128 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 MAP3K9P80192 1104 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 MTF1Q14872 753 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 ARHGAP29Q52LW3 1261 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 RAD9BQ6WBX8 426 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 MAGEF1Q9HAY2 307 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 SMCO2A6NFE2 343 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 FECHP22830 423 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
VCAN-204ENST00000502527 STIM1Q13586 685 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 TBC1D16Q8TBP0 767 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 ZMYND15Q9H091 742 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 VPS16Q9H269 839 aa18.66■□□□□ 0.58
VCAN-204ENST00000502527 TADA3O75528 432 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 OR52Z1P0C646 297 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 NOVP48745 357 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 USP17L2Q6R6M4 530 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 CEP95Q96GE4 821 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 CARD6Q9BX69 1037 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 MRPL44Q9H9J2 332 aaKnown RBP18.65■□□□□ 0.58
VCAN-204ENST00000502527 TAB2Q9NYJ8 693 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 POLLQ9UGP5 575 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 FXR1P51114 621 aaKnown RBP eCLIP18.65■□□□□ 0.58
VCAN-204ENST00000502527 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 CRAMP1Q96RY5 1269 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
VCAN-204ENST00000502527 C6orf229H3BNL8 230 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 CCNT1O60563 726 aaKnown RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 RHOBTB3O94955 611 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 ZSCAN20P17040 1043 aaPredicted RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 ORC2Q13416 577 aaPredicted RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 CABP7Q86V35 215 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 CPVLQ9H3G5 476 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 KLRC4O43908 158 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 CREBRFQ8IUR6 639 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 CCDC47Q96A33 483 aaKnown RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 THAP9Q9H5L6 903 aa18.64■□□□□ 0.57
VCAN-204ENST00000502527 ARGLU1Q9NWB6 273 aaPredicted RBP18.64■□□□□ 0.57
VCAN-204ENST00000502527 ESYT2A0FGR8 921 aa18.63■□□□□ 0.57
VCAN-204ENST00000502527 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
VCAN-204ENST00000502527 PSMA7O14818 248 aa18.63■□□□□ 0.57
VCAN-204ENST00000502527 EEF1GP26641 437 aaKnown RBP18.63■□□□□ 0.57
VCAN-204ENST00000502527 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
VCAN-204ENST00000502527 PLIN2Q99541 437 aa18.63■□□□□ 0.57
VCAN-204ENST00000502527 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
VCAN-204ENST00000502527 GTPBP4Q9BZE4 634 aaKnown RBP18.63■□□□□ 0.57
VCAN-204ENST00000502527 ABHD10Q9NUJ1 306 aa18.63■□□□□ 0.57
VCAN-204ENST00000502527 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
VCAN-204ENST00000502527 KIF5CO60282 957 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 UBXN1Q04323 297 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 KRT222Q8N1A0 295 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
VCAN-204ENST00000502527 PIGSQ96S52 555 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 RIOX1Q9H6W3 641 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 VAT1LQ9HCJ6 419 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 LZTFL1Q9NQ48 299 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 TTF2Q9UNY4 1162 aaKnown RBP18.62■□□□□ 0.57
VCAN-204ENST00000502527 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 PLCG1P19174 1290 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 PPP2R3AQ06190 1150 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
VCAN-204ENST00000502527 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 REXO1Q8N1G1 1221 aaKnown RBP18.62■□□□□ 0.57
VCAN-204ENST00000502527 DHTKD1Q96HY7 919 aaPredicted RBP18.62■□□□□ 0.57
VCAN-204ENST00000502527 FAM53CQ9NYF3 392 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 DAGLAQ9Y4D2 1042 aa18.62■□□□□ 0.57
VCAN-204ENST00000502527 PLIN4Q96Q06 1357 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 TRIM47Q96LD4 638 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 ZNF446Q9NWS9 450 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 MAGEC2Q9UBF1 373 aaPredicted RBP18.61■□□□□ 0.57
VCAN-204ENST00000502527 SUGT1Q9Y2Z0 365 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
VCAN-204ENST00000502527 TRIM49BA6NDI0 452 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 LGALS16A8MUM7 142 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms