RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CWC22Q9HCG8 908 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 TMOD2Q9NZR1 351 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 FAM198AQ9UFP1 575 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 ATMQ13315 3056 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 LINC01553A4QN01 128 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 ARVCFO00192 962 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 RARBP10826 455 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 PRKAR2BP31323 418 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
CSTF1-207ENST00000498689 SHC2P98077 582 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 CHRNDQ07001 517 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
CSTF1-207ENST00000498689 CWF19L1Q69YN2 538 aaKnown RBP6.14□□□□□ -1.43
CSTF1-207ENST00000498689 NYAP1Q6ZVC0 841 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 SH3BP5LQ7L8J4 393 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 ZNF804AQ7Z570 1209 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 TTLL11Q8NHH1 800 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 RIN2Q8WYP3 895 aaPredicted RBP6.14□□□□□ -1.43
CSTF1-207ENST00000498689 RUNDC1Q96C34 613 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 RPGRIP1Q96KN7 1286 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 ZDHHC15Q96MV8 337 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 LSM14BQ9BX40 385 aaKnown RBP6.14□□□□□ -1.43
CSTF1-207ENST00000498689 SEMA4AQ9H3S1 761 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 SRPK3Q9UPE1 567 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 MROH7Q68CQ1 1323 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 SYNRGQ9UMZ2 1314 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 DOCK8Q8NF50 2099 aa6.14□□□□□ -1.43
CSTF1-207ENST00000498689 PLXNA4Q9HCM2 1894 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 FAM196BA6NMK8 535 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 COBLO75128 1261 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 SDHBP21912 280 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 ICAM3P32942 547 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 CCDC6Q16204 474 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 OLFML2BQ68BL8 750 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 C15orf52Q6ZUT6 534 aaKnown RBP6.13□□□□□ -1.43
CSTF1-207ENST00000498689 RPUSD2Q8IZ73 545 aaKnown RBP6.13□□□□□ -1.43
CSTF1-207ENST00000498689 KLHDC9Q8NEP7 349 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 PLBD2Q8NHP8 589 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 NUP133Q8WUM0 1156 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 TEKT1Q969V4 418 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 TGS1Q96RS0 853 aaKnown RBP6.13□□□□□ -1.43
CSTF1-207ENST00000498689 TRPV6Q9H1D0 765 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 ANKFY1Q9P2R3 1169 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 CD207Q9UJ71 328 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 TSR3Q9UJK0 312 aaKnown RBP6.13□□□□□ -1.43
CSTF1-207ENST00000498689 DOPEY2Q9Y3R5 2298 aa6.13□□□□□ -1.43
CSTF1-207ENST00000498689 MYH7BA7E2Y1 1941 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 KIF28PB7ZC32 967 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 CTNND1O60716 968 aaKnown RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 BRD1O95696 1058 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 PRB1P04280 392 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 TGM1P22735 817 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 ADORA2AP29274 412 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 HOXA7P31268 230 aaPredicted RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 CTSWP56202 376 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 HYAL1Q12794 435 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 NBR1Q14596 966 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 RRP1BQ14684 758 aaKnown RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 SH3D19Q5HYK7 790 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 AMER1Q5JTC6 1135 aaPredicted RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 CDC42EP5Q6NZY7 148 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 DPP9Q86TI2 863 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 CCDC105Q8IYK2 499 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 ZNF280CQ8ND82 737 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 SPATA18Q8TC71 538 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 PHOSPHO2Q8TCD6 241 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 VTI1AQ96AJ9 217 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 TSEN34Q9BSV6 310 aaKnown RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 ANKRD2Q9GZV1 360 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 RSPH6AQ9H0K4 717 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 INCENPQ9NQS7 918 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
CSTF1-207ENST00000498689 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 LRRFIP2Q9Y608 721 aaKnown RBP6.12□□□□□ -1.43
CSTF1-207ENST00000498689 GREB1Q4ZG55 1949 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 MGAQ8IWI9 3026 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 MAST3O60307 1309 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 ELP1O95163 1332 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 POLQO75417 2590 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 A0A0U1RQG5 324 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 PRR5-ARHGAP8B1AHC4 643 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 TLR3O15455 904 aaKnown RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 MAP3K7O43318 606 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 PCCAP05165 728 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 ASGR1P07306 291 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 SP100P23497 879 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 RRP1P56182 461 aaKnown RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 DEFB103AP81534 67 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 ARHGAP8P85298 464 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 MTMR2Q13614 643 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 TIGD5Q53EQ6 642 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 CDCA8Q53HL2 280 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 C19orf48Q6RUI8 117 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 TMEFF1Q8IYR6 380 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 NSUN3Q9H649 340 aaKnown RBP6.11□□□□□ -1.43
CSTF1-207ENST00000498689 PARD6AQ9NPB6 346 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms