RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 HTRA3P83110 453 aa20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 FUT2Q10981 343 aa20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 NECAB1Q8N987 351 aa20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 CCDC12Q8WUD4 166 aaPredicted RBP20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 AMNQ9BXJ7 453 aa20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 CYTH3O43739 400 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 TLR2O60603 784 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 SLC25A27O95847 323 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 ICAM1P05362 532 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 FAM110CQ1W6H9 321 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 SLC26A6Q9BXS9 759 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 VAT1LQ9HCJ6 419 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 MORF4L1Q9UBU8 362 aa20.31■□□□□ 0.84
CTDSP1-215ENST00000498160 CYP2C8P10632 490 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 PDIA4P13667 645 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 PPP1R18Q6NYC8 613 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 SAMD1Q6SPF0 538 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 FBXO11Q86XK2 927 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 RGS22Q8NE09 1264 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 NSUN7Q8NE18 718 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 PIGSQ96S52 555 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 ZIC5Q96T25 663 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 DAXXQ9UER7 740 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 FBXO40Q9UH90 709 aa20.3■□□□□ 0.84
CTDSP1-215ENST00000498160 ABCB11O95342 1321 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 PTPDC1A2A3K4 754 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 QRICH1Q2TAL8 776 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 HOMER1Q86YM7 354 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 SHCBP1Q8NEM2 672 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 REPS2Q8NFH8 660 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 GPRC5AQ8NFJ5 357 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 GLT8D2Q9H1C3 349 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 SH3GLB2Q9NR46 395 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 ORC3Q9UBD5 711 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-215ENST00000498160 ADGRA2Q96PE1 1338 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 MYH6P13533 1939 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 SCG2P13521 617 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 STAT3P40763 770 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 ERVK-9P63128 1117 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 ERVK-24P63145 666 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 RIOX2Q8IUF8 465 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 PHKBQ93100 1093 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 SPATC1LQ9H0A9 340 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 ZNF214Q9UL59 606 aaPredicted RBP20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 CCPG1Q9ULG6 757 aa20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 MRPL11Q9Y3B7 192 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-215ENST00000498160 CTDNEP1O95476 244 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 ST3GAL1Q11201 340 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 CRHR2Q13324 411 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 CMTR1Q8N1G2 835 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 CHST13Q8NET6 341 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 CPVLQ9H3G5 476 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 RBPJLQ9UBG7 517 aa20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-215ENST00000498160 BCRP11274 1271 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 PDCP20941 246 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 PLS1Q14651 629 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 TMEM132BQ14DG7 1078 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 SLC35G1Q2M3R5 365 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 SNRNP48Q6IEG0 339 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 MCF2L2Q86YR7 1114 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 CCAR1Q8IX12 1150 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 MROH8Q9H579 483 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 BARHL2Q9NY43 387 aa20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 MAP3K20Q9NYL2 800 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-215ENST00000498160 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 MAPK4P31152 587 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 TRIM29Q14134 588 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 GALNT17Q6IS24 598 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 ANKRD13CQ8N6S4 541 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 CWC22Q9HCG8 908 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 PCDHA1Q9Y5I3 950 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 ZNF536O15090 1300 aa20.25■□□□□ 0.83
CTDSP1-215ENST00000498160 ESYT2A0FGR8 921 aa20.24■□□□□ 0.83
CTDSP1-215ENST00000498160 CNMDO75829 334 aa20.24■□□□□ 0.83
CTDSP1-215ENST00000498160 GNA11P29992 359 aa20.24■□□□□ 0.83
CTDSP1-215ENST00000498160 ARHGEF6Q15052 776 aa20.24■□□□□ 0.83
CTDSP1-215ENST00000498160 MCTP2Q6DN12 878 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms