RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TOR1AIP2Q8NFQ8 470 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 FMNL2Q96PY5 1086 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 EIF3CQ99613 913 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 SCNM1Q9BWG6 230 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 EBF3Q9H4W6 596 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PRDM7Q9NQW5 492 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 NOD1Q9Y239 953 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 LRCH1Q9Y2L9 728 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TRAF6Q9Y4K3 522 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 CTDP1Q9Y5B0 961 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 ZDBF2Q9HCK1 2354 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 LRPPRCP42704 1394 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 FXYD6-FXYD2A0A087WZ82 144 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP9-6A0A140TA67 174 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 DCDC2BA2VCK2 349 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PRAMEF27A3QJZ7 478 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TMCO5BA8MYB1 307 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 C9orf172C9J069 976 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PROB1E7EW31 1015 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MPHOSPH10O00566 681 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 CHRNA1P02708 482 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SCNN1AP37088 669 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SSR1P43307 286 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 MAPK8P45983 427 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 GSTO1P78417 241 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TPRNQ4KMQ1 711 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 BEND4Q6ZU67 534 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 NOL8Q76FK4 1167 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 TAS1R3Q7RTX0 852 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TMC6Q7Z403 805 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 TXNDC2Q86VQ3 553 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ERICH1Q86X53 443 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TDHQ8IZJ6 230 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 LINC00528Q8N1L1 170 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SGCDQ92629 289 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 CDK5RAP3Q96JB5 506 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 LRRC3BQ96PB8 259 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MED15Q96RN5 788 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PKP4Q99569 1192 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SH2D3AQ9BRG2 576 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 C19orf44Q9H6X5 657 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 AVENQ9NQS1 362 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 NDRG2Q9UN36 371 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 HDAC5Q9UQL6 1122 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ACEP12821 1306 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 FAM155AB1AL88 458 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 J3KR12 359 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 GSC2O15499 205 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PRKCSHP14314 528 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 HDCP19113 662 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 HK2P52789 917 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 UFM1P61960 85 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SRSF11Q05519 484 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 SLC39A14Q15043 492 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 B4GALNT3Q6L9W6 998 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TRIM22Q8IYM9 498 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 CFAP206Q8IYR0 622 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MCOLN2Q8IZK6 566 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ADCY4Q8NFM4 1077 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ALS2CR12Q96Q35 445 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TRIM7Q9C029 511 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 FZD8Q9H461 694 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 FBRSL1Q9HCM7 1045 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 ZDHHC4Q9NPG8 344 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 NMRK2Q9NPI5 230 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PPP4R2Q9NY27 417 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MTMR6Q9Y217 621 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SALL1Q9NSC2 1324 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 EEA1Q15075 1411 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 IFIT3O14879 490 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 SLC24A1O60721 1099 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 FOXH1O75593 365 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PLA2G1BP04054 148 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 NDUFV2P19404 249 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MX2P20592 715 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TGM4P49221 684 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 UBASH3AP57075 661 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 CAMK1Q14012 370 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 KRT33BQ14525 404 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PDCD2Q16342 344 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 SLC15A2Q16348 729 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 C11orf91Q3C1V1 193 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 HMBOX1Q6NT76 420 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TBC1D9Q6ZT07 1266 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 DGLUCYQ7Z3D6 616 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SH2D6Q7Z4S9 175 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 NT5DC4Q86YG4 428 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 KSR1Q8IVT5 923 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 SLC44A3Q8N4M1 653 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 NUP133Q8WUM0 1156 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 C17orf50Q8WW18 174 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 HPS1Q92902 700 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 KCNB2Q92953 911 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 VPS33BQ9H267 617 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 COG4Q9H9E3 785 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 RNF7Q9UBF6 113 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 DOLKQ9UPQ8 538 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 USP20Q9Y2K6 914 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms