RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 RCC1LQ96I51 464 aaKnown RBP4.52□□□□□ -1.69
RIF1-212ENST00000498041 PPP1R1BQ9UD71 204 aaPredicted RBP4.52□□□□□ -1.69
RIF1-212ENST00000498041 ZMYM5Q9UJ78 669 aa4.52□□□□□ -1.69
RIF1-212ENST00000498041 SUGT1Q9Y2Z0 365 aa4.52□□□□□ -1.69
RIF1-212ENST00000498041 FITM1A5D6W6 292 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 B2RBV5 119 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 HPXP02790 462 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 CFPP27918 469 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.69
RIF1-212ENST00000498041 CHRNEQ04844 493 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 RAB33AQ14088 237 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 PPP2R5DQ14738 602 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 MPZL3Q6UWV2 235 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 ARHGEF39Q8N4T4 335 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 ANKS4BQ8N8V4 417 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 MICAL1Q8TDZ2 1067 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 KIRREL1Q96J84 757 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 FCRL2Q96LA5 508 aaPredicted RBP4.51□□□□□ -1.69
RIF1-212ENST00000498041 ZDHHC15Q96MV8 337 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 TOX2Q96NM4 488 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 G6PC3Q9BUM1 346 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 CDADC1Q9BWV3 514 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 SLC12A9Q9BXP2 914 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 TRIM55Q9BYV6 548 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 CGGBP1Q9UFW8 167 aaPredicted RBP4.51□□□□□ -1.69
RIF1-212ENST00000498041 EBF1Q9UH73 591 aa4.51□□□□□ -1.69
RIF1-212ENST00000498041 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 NOP56O00567 594 aaKnown RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 GJB6O95452 261 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 GSTM1P09488 218 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 KIR2DL1P43626 348 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 KIR2DL2P43627 348 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 ERVFC1P60507 584 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 MESP2Q0VG99 397 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 GRB10Q13322 594 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 NR0B2Q15466 257 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 DDR2Q16832 855 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 RTP2Q5QGT7 225 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 NBPF6Q5VWK0 638 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 FYB2Q5VWT5 728 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 LILRA6Q6PI73 481 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 POMZP3Q6PJE2 187 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 ZPBP2Q6X784 338 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 SYDE1Q6ZW31 735 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 LRRC56Q8IYG6 542 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 LILRA2Q8N149 483 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 CRACR2BQ8N4Y2 399 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 CELF2-AS1Q8N7Q2 184 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 ZNF513Q8N8E2 541 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 BVESQ8NE79 360 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 ABHD4Q8TB40 342 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 ZSCAN18Q8TBC5 510 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 MYLIPQ8WY64 445 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 MAP6Q96JE9 813 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 NBPF4Q96M43 638 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 FCRL3Q96P31 734 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 HIRIP3Q9BW71 556 aaPredicted RBP4.5□□□□□ -1.69
RIF1-212ENST00000498041 ST7Q9NRC1 585 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 AP5S1Q9NUS5 200 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 TNFRSF10DQ9UBN6 386 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 APEX2Q9UBZ4 518 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 AKT3Q9Y243 479 aa4.5□□□□□ -1.69
RIF1-212ENST00000498041 ZNF503-AS2A6NEH8 195 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 U2SURPO15042 1029 aaKnown RBP4.49□□□□□ -1.69
RIF1-212ENST00000498041 SUSD5O60279 629 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 VAMP4O75379 141 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 CD3EP07766 207 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 AMPD2Q01433 879 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 RBL2Q08999 1139 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 SLC14A2Q15849 920 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 SV2CQ496J9 727 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 TMEM67Q5HYA8 995 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 MRM1Q6IN84 353 aaKnown RBP4.49□□□□□ -1.69
RIF1-212ENST00000498041 PRR23BQ6ZRT6 265 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 EEPD1Q7L9B9 569 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 SREK1Q8WXA9 508 aaKnown RBP4.49□□□□□ -1.69
RIF1-212ENST00000498041 PPP1R14AQ96A00 147 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 HHIPL1Q96JK4 782 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 EPN3Q9H201 632 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 SP110Q9HB58 689 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 ERVK13-1Q9NX77 482 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 EMC9Q9Y3B6 208 aa4.49□□□□□ -1.69
RIF1-212ENST00000498041 FADS2P1A8MWK0 482 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 B8ZZF3 427 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 USP2O75604 605 aaPredicted RBP4.48□□□□□ -1.69
RIF1-212ENST00000498041 GLI1P08151 1106 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 ZSCAN22P10073 491 aaPredicted RBP4.48□□□□□ -1.69
RIF1-212ENST00000498041 TRHRP34981 398 aaPredicted RBP4.48□□□□□ -1.69
RIF1-212ENST00000498041 SNX17Q15036 470 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 DPY19L1Q2PZI1 675 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 SOGA3Q5TF21 947 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 LCNL1Q6ZST4 164 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 CEP128Q6ZU80 1094 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 ANKLE2Q86XL3 938 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 NAT16Q8N8M0 369 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 DIRC2Q96SL1 478 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 C19orf44Q9H6X5 657 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 FAM53CQ9NYF3 392 aa4.48□□□□□ -1.69
RIF1-212ENST00000498041 LRP2BPQ9P2M1 347 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms