RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 ZNF536O15090 1300 aa18.4■□□□□ 0.54
PTK7-220ENST00000497957 BAG4O95429 457 aaKnown RBP18.39■□□□□ 0.53
PTK7-220ENST00000497957 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
PTK7-220ENST00000497957 TNFRSF25Q93038 417 aa18.39■□□□□ 0.53
PTK7-220ENST00000497957 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
PTK7-220ENST00000497957 TMEM260Q9NX78 707 aa18.39■□□□□ 0.53
PTK7-220ENST00000497957 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
PTK7-220ENST00000497957 WNT7AO00755 349 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 RASAL3Q86YV0 1011 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 REPS2Q8NFH8 660 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
PTK7-220ENST00000497957 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 GDPD2Q9HCC8 539 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 RAVER2Q9HCJ3 691 aaKnown RBP18.38■□□□□ 0.53
PTK7-220ENST00000497957 TFIP11Q9UBB9 837 aaKnown RBP18.38■□□□□ 0.53
PTK7-220ENST00000497957 CNPY2Q9Y2B0 182 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 MYH15Q9Y2K3 1946 aa18.38■□□□□ 0.53
PTK7-220ENST00000497957 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
PTK7-220ENST00000497957 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 OPLAHO14841 1288 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 DSG3P32926 999 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 KRT2P35908 639 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 NBR1Q14596 966 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 UBE2SQ16763 222 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 PRPF38AQ8NAV1 312 aaKnown RBP18.37■□□□□ 0.53
PTK7-220ENST00000497957 BRI3BPQ8WY22 251 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 TBC1D5Q92609 795 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
PTK7-220ENST00000497957 SH3GLB2Q9NR46 395 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
PTK7-220ENST00000497957 SPDYE16A6NNV3 312 aaPredicted RBP18.36■□□□□ 0.53
PTK7-220ENST00000497957 M0R2N6 131 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 TOMM70O94826 608 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 U2AF2P26368 475 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTK7-220ENST00000497957 SAPCD2Q86UD0 394 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 CPXCR1Q8N123 301 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 PCDHA4Q9UN74 947 aa18.36■□□□□ 0.53
PTK7-220ENST00000497957 UNCXA6NJT0 531 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 VWA5AO00534 786 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 SNAPC2Q13487 334 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
PTK7-220ENST00000497957 AMNQ9BXJ7 453 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 ZMYND12Q9H0C1 365 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 BIN2Q9UBW5 565 aaPredicted RBP18.35■□□□□ 0.53
PTK7-220ENST00000497957 PCDHA6Q9UN73 950 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 PCDHA8Q9Y5H6 950 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 TLL2Q9Y6L7 1015 aa18.35■□□□□ 0.53
PTK7-220ENST00000497957 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 BTBD19C9JJ37 291 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 XBP1P17861 261 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 TOB1P50616 345 aaPredicted RBP18.34■□□□□ 0.53
PTK7-220ENST00000497957 ZNF157P51786 506 aaPredicted RBP18.34■□□□□ 0.53
PTK7-220ENST00000497957 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
PTK7-220ENST00000497957 COG2Q14746 738 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 CCL15Q16663 113 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 MUM1L1Q5H9M0 696 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 NOSTRINQ8IVI9 506 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 DAGLBQ8NCG7 672 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 USP28Q96RU2 1077 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 ZIC5Q96T25 663 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 PTPN18Q99952 460 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 ASCC2Q9H1I8 757 aaPredicted RBP18.34■□□□□ 0.53
PTK7-220ENST00000497957 ADAMTS5Q9UNA0 930 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
PTK7-220ENST00000497957 TCHHQ07283 1943 aa18.33■□□□□ 0.53
PTK7-220ENST00000497957 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 CNMDO75829 334 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.52
PTK7-220ENST00000497957 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 ADCY7P51828 1080 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
PTK7-220ENST00000497957 TMEM132BQ14DG7 1078 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTK7-220ENST00000497957 RGMBQ6NW40 437 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 USP17L6PQ6QN14 398 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 CLEC17AQ6ZS10 378 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 CCDC148Q8NFR7 591 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
PTK7-220ENST00000497957 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
PTK7-220ENST00000497957 BTBD7Q9P203 1132 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 CCPG1Q9ULG6 757 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms