RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SYDE2Q5VT97 1194 aa23.29■■□□□ 1.32
CTSD-206ENST00000497544 GTF3C2Q8WUA4 911 aaPredicted RBP23.29■■□□□ 1.32
CTSD-206ENST00000497544 SLKQ9H2G2 1235 aaPredicted RBP23.29■■□□□ 1.32
CTSD-206ENST00000497544 RBM28Q9NW13 759 aaKnown RBP23.29■■□□□ 1.32
CTSD-206ENST00000497544 LIMCH1Q9UPQ0 1083 aa23.29■■□□□ 1.32
CTSD-206ENST00000497544 VCANP13611 3396 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
CTSD-206ENST00000497544 GCLCP48506 637 aaPredicted RBP23.28■■□□□ 1.32
CTSD-206ENST00000497544 CCT2P78371 535 aaKnown RBP23.28■■□□□ 1.32
CTSD-206ENST00000497544 ATG4CQ96DT6 458 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 LZTS2Q9BRK4 669 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 PRR12Q9ULL5 1215 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 TPCN1Q9ULQ1 816 aa23.28■■□□□ 1.32
CTSD-206ENST00000497544 BAZ2BQ9UIF8 2168 aaKnown RBP23.27■■□□□ 1.32
CTSD-206ENST00000497544 TLR2O60603 784 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 ZBED4O75132 1171 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 FDX1P10109 184 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 STK3Q13188 491 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 LBX2Q6XYB7 198 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 STXBP5LQ9Y2K9 1186 aa23.27■■□□□ 1.32
CTSD-206ENST00000497544 UBE2Q1Q7Z7E8 422 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 MB21D1Q8N884 522 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 ZSCAN31Q96LW9 406 aaPredicted RBP23.26■■□□□ 1.31
CTSD-206ENST00000497544 PAGR1Q9BTK6 254 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 CPVLQ9H3G5 476 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 CPA4Q9UI42 421 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 ADAMTS5Q9UNA0 930 aa23.26■■□□□ 1.31
CTSD-206ENST00000497544 RLFQ13129 1914 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 VWA5AO00534 786 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 SMARCA1P28370 1054 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 CDC27P30260 824 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 MCM2P49736 904 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 ADGRF4Q8IZF3 695 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 HTATIP2Q9BUP3 242 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 RBPJLQ9UBG7 517 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 RABGAP1Q9Y3P9 1069 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 NR2E3Q9Y5X4 410 aa23.25■■□□□ 1.31
CTSD-206ENST00000497544 PARP14Q460N5 1801 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 SPTBN5Q9NRC6 3674 aaKnown RBP23.24■■□□□ 1.31
CTSD-206ENST00000497544 PLEKHA8P1O95397 391 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
CTSD-206ENST00000497544 ME3Q16798 604 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 Q7L0L9 218 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 CCDC82Q8N4S0 544 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 DEFB123Q8N688 67 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 ANKRD13CQ8N6S4 541 aa23.24■■□□□ 1.31
CTSD-206ENST00000497544 FAM217BQ9NTX9 383 aaPredicted RBP23.24■■□□□ 1.31
CTSD-206ENST00000497544 CPLX1O14810 134 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 PFKFB2O60825 505 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 SNAP25P60880 206 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 PLS1Q14651 629 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 ARHGEF6Q15052 776 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 MTFR1Q15390 333 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
CTSD-206ENST00000497544 TMTC3Q6ZXV5 915 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 CPXCR1Q8N123 301 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 CMTR1Q8N1G2 835 aaKnown RBP23.23■■□□□ 1.31
CTSD-206ENST00000497544 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
CTSD-206ENST00000497544 RIOX1Q9H6W3 641 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 SLC38A10Q9HBR0 1119 aa23.23■■□□□ 1.31
CTSD-206ENST00000497544 C17orf99Q6UX52 265 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 GPRC5AQ8NFJ5 357 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 JMJD4Q9H9V9 463 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 NCOA5Q9HCD5 579 aaKnown RBP23.22■■□□□ 1.31
CTSD-206ENST00000497544 TXNRD2Q9NNW7 524 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
CTSD-206ENST00000497544 BTBD7Q9P203 1132 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 NID2Q14112 1375 aa23.22■■□□□ 1.31
CTSD-206ENST00000497544 LARGE1O95461 756 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 SCRN1Q12765 414 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 GPR153Q6NV75 609 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 CCDC174Q6PII3 467 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 POTEEQ6S8J3 1075 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 NECAB1Q8N987 351 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 PIBF1Q8WXW3 757 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 RRP36Q96EU6 259 aaKnown RBP23.21■■□□□ 1.31
CTSD-206ENST00000497544 RANBP17Q9H2T7 1088 aaKnown RBP23.21■■□□□ 1.31
CTSD-206ENST00000497544 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
CTSD-206ENST00000497544 MORF4L1Q9UBU8 362 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
CTSD-206ENST00000497544 MYH6P13533 1939 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 COL11A1P12107 1806 aaPredicted RBP23.2■■□□□ 1.3
CTSD-206ENST00000497544 CYTH3O43739 400 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
CTSD-206ENST00000497544 BCRP11274 1271 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 STAT3P40763 770 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 ERVK-9P63128 1117 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 ERVK-24P63145 666 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 CCNA1P78396 465 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 TMEM132BQ14DG7 1078 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
CTSD-206ENST00000497544 FAM110CQ1W6H9 321 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 Q3C1V9 767 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
CTSD-206ENST00000497544 PEX10O60683 326 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 CNMDO75829 334 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 OAZ1P54368 228 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms