RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 KIF7Q2M1P5 1343 aa7.4□□□□□ -1.22
GGPS1-208ENST00000497327 SCAF11Q99590 1463 aaKnown RBP7.4□□□□□ -1.22
GGPS1-208ENST00000497327 ADAMTSL3P82987 1691 aa7.4□□□□□ -1.23
GGPS1-208ENST00000497327 PPLO60437 1756 aa7.4□□□□□ -1.23
GGPS1-208ENST00000497327 KIAA1210Q9ULL0 1709 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 ADGRB1O14514 1584 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 RIMS2Q9UQ26 1411 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 TMEM2Q9UHN6 1383 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 PRR36Q9H6K5 1346 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 F13A1P00488 732 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 PF4P02776 101 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 PLCG1P19174 1290 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 TPP2P29144 1249 aaPredicted RBP7.39□□□□□ -1.23
GGPS1-208ENST00000497327 DDX10Q13206 875 aaKnown RBP7.39□□□□□ -1.23
GGPS1-208ENST00000497327 CAMK2GQ13555 558 aaPredicted RBP7.39□□□□□ -1.23
GGPS1-208ENST00000497327 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 FAM13CQ8NE31 585 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 ABHD4Q8TB40 342 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 GATAD2BQ8WXI9 593 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 DIRC2Q96SL1 478 aa7.39□□□□□ -1.23
GGPS1-208ENST00000497327 POLR3KQ9Y2Y1 108 aaPredicted RBP7.39□□□□□ -1.23
GGPS1-208ENST00000497327 LRRN2O75325 713 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 C1QTNF9P0C862 333 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 HK2P52789 917 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 TAGLNQ01995 201 aaKnown RBP7.38□□□□□ -1.23
GGPS1-208ENST00000497327 TSPYL5Q86VY4 417 aaPredicted RBP7.38□□□□□ -1.23
GGPS1-208ENST00000497327 FBXO15Q8NCQ5 510 aaPredicted RBP7.38□□□□□ -1.23
GGPS1-208ENST00000497327 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.38□□□□□ -1.23
GGPS1-208ENST00000497327 CRELD1Q96HD1 420 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 C3P01024 1663 aa7.38□□□□□ -1.23
GGPS1-208ENST00000497327 SETBP1Q9Y6X0 1596 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 ARHGAP23Q9P227 1491 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 RAC2P15153 192 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 LCNL1Q6ZST4 164 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 SLFN12Q8IYM2 578 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 TRIT1Q9H3H1 467 aaKnown RBP7.37□□□□□ -1.23
GGPS1-208ENST00000497327 FER1L4A9Z1Z3 1794 aa7.37□□□□□ -1.23
GGPS1-208ENST00000497327 KDM5AP29375 1690 aaKnown RBP7.37□□□□□ -1.23
GGPS1-208ENST00000497327 DNAJA2O60884 412 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 ZGLP1P0C6A0 271 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 LTKP29376 864 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 TRHRP34981 398 aaPredicted RBP7.36□□□□□ -1.23
GGPS1-208ENST00000497327 YARSP54577 528 aaKnown RBP7.36□□□□□ -1.23
GGPS1-208ENST00000497327 XPCQ01831 940 aaPredicted RBP7.36□□□□□ -1.23
GGPS1-208ENST00000497327 TMEM132EQ6IEE7 984 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 REV1Q9UBZ9 1251 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 SLIT1O75093 1534 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 ASXL1Q8IXJ9 1541 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 PTPRMP28827 1452 aa7.36□□□□□ -1.23
GGPS1-208ENST00000497327 DISP3Q9P2K9 1392 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 SBNO2Q9Y2G9 1366 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 IQGAP1P46940 1657 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 BPNT1O95861 308 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 GARTP22102 1010 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 EGR3Q06889 387 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 AEBP1Q8IUX7 1158 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 LRRC56Q8IYG6 542 aaPredicted RBP7.35□□□□□ -1.23
GGPS1-208ENST00000497327 TMEM74Q96NL1 305 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 RSRP1Q9BUV0 290 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 PCDHA11Q9Y5I1 949 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 MYO5BQ9ULV0 1848 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 UBR1Q8IWV7 1749 aa7.35□□□□□ -1.23
GGPS1-208ENST00000497327 EIF3AQ14152 1382 aaKnown RBP7.34□□□□□ -1.23
GGPS1-208ENST00000497327 PLEKHG1Q9ULL1 1385 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 ALKQ9UM73 1620 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 HTR3BO95264 441 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 TMF1P82094 1093 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 ANKLE2Q86XL3 938 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 HOMEZQ8IX15 550 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 THEMISQ8N1K5 641 aaPredicted RBP7.34□□□□□ -1.23
GGPS1-208ENST00000497327 BAHD1Q8TBE0 780 aaPredicted RBP7.34□□□□□ -1.23
GGPS1-208ENST00000497327 KREMEN1Q96MU8 473 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 RNF32Q9H0A6 362 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 CD320Q9NPF0 282 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 KCNH3Q9ULD8 1083 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 MED14O60244 1454 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 RIMS1Q86UR5 1692 aaKnown RBP7.34□□□□□ -1.23
GGPS1-208ENST00000497327 ADAMTS13Q76LX8 1427 aa7.34□□□□□ -1.23
GGPS1-208ENST00000497327 METP08581 1390 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
GGPS1-208ENST00000497327 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 GRIN3BO60391 1043 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 SORBS3O60504 671 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 PDZD8Q8NEN9 1154 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 FBXO27Q8NI29 283 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 VWCEQ96DN2 955 aa7.33□□□□□ -1.24
GGPS1-208ENST00000497327 DCP1AQ9NPI6 582 aaPredicted RBP7.33□□□□□ -1.24
GGPS1-208ENST00000497327 YTHDC2Q9H6S0 1430 aaKnown RBP7.33□□□□□ -1.24
GGPS1-208ENST00000497327 LRPPRCP42704 1394 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms