RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 RBBP6Q7Z6E9 1792 aaKnown RBP21.25■□□□□ 0.99
TSSC4-210ENST00000496468 K7ELQ4 463 aaPredicted RBP21.25■□□□□ 0.99
TSSC4-210ENST00000496468 ZBTB5O15062 677 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 BCRP11274 1271 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 OAZ1P54368 228 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 ERVK-9P63128 1117 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 ERVK-24P63145 666 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 PLS1Q14651 629 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 NTRK3Q16288 839 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 QRICH1Q2TAL8 776 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 POTEEQ6S8J3 1075 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 TRIM22Q8IYM9 498 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 JMYQ8N9B5 988 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 PHKBQ93100 1093 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 PIGSQ96S52 555 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 TEX13BQ9BXU2 312 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 RAVER2Q9HCJ3 691 aaKnown RBP21.25■□□□□ 0.99
TSSC4-210ENST00000496468 RBM27Q9P2N5 1060 aaKnown RBP21.25■□□□□ 0.99
TSSC4-210ENST00000496468 MORF4L1Q9UBU8 362 aa21.25■□□□□ 0.99
TSSC4-210ENST00000496468 ZNF214Q9UL59 606 aaPredicted RBP21.25■□□□□ 0.99
TSSC4-210ENST00000496468 PEX10O60683 326 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 TBC1D8O95759 1140 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 ICAM1P05362 532 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 AKAP17AQ02040 695 aaKnown RBP21.24■□□□□ 0.99
TSSC4-210ENST00000496468 SNRNP48Q6IEG0 339 aaKnown RBP21.24■□□□□ 0.99
TSSC4-210ENST00000496468 CPXCR1Q8N123 301 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 GPRC5AQ8NFJ5 357 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 RNF26Q9BY78 433 aaPredicted RBP21.24■□□□□ 0.99
TSSC4-210ENST00000496468 SPATC1LQ9H0A9 340 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 WBP1LQ9NX94 342 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 RBPJLQ9UBG7 517 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 PNMA2Q9UL42 364 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 CCPG1Q9ULG6 757 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 PCNTO95613 3336 aa21.24■□□□□ 0.99
TSSC4-210ENST00000496468 PTPDC1A2A3K4 754 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 ATP2A1O14983 1001 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 PPFIA3O75145 1194 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 CCNA1P78396 465 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 C17orf99Q6UX52 265 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 ZNF536O15090 1300 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 STK36Q9NRP7 1315 aa21.23■□□□□ 0.99
TSSC4-210ENST00000496468 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
TSSC4-210ENST00000496468 PNMA6FA0A0J9YX94 578 aa21.22■□□□□ 0.99
TSSC4-210ENST00000496468 hCG_1642624A0A1W2PR95 340 aa21.22■□□□□ 0.99
TSSC4-210ENST00000496468 FMNL1O95466 1100 aaPredicted RBP21.22■□□□□ 0.99
TSSC4-210ENST00000496468 COPB2P35606 906 aa21.22■□□□□ 0.99
TSSC4-210ENST00000496468 SSRP1Q08945 709 aaKnown RBP21.22■□□□□ 0.99
TSSC4-210ENST00000496468 USH1GQ495M9 461 aa21.22■□□□□ 0.99
TSSC4-210ENST00000496468 FBXO11Q86XK2 927 aa21.22■□□□□ 0.99
TSSC4-210ENST00000496468 NSUN7Q8NE18 718 aaKnown RBP21.22■□□□□ 0.99
TSSC4-210ENST00000496468 PRPF3O43395 683 aaKnown RBP21.21■□□□□ 0.99
TSSC4-210ENST00000496468 CTDNEP1O95476 244 aa21.21■□□□□ 0.99
TSSC4-210ENST00000496468 TAL1P17542 331 aaPredicted RBP21.21■□□□□ 0.99
TSSC4-210ENST00000496468 STAT3P40763 770 aa21.21■□□□□ 0.99
TSSC4-210ENST00000496468 AGBL1Q96MI9 1066 aa21.21■□□□□ 0.99
TSSC4-210ENST00000496468 LLPHQ9BRT6 129 aaKnown RBP21.21■□□□□ 0.99
TSSC4-210ENST00000496468 AMNQ9BXJ7 453 aa21.21■□□□□ 0.99
TSSC4-210ENST00000496468 MOV10L1Q9BXT6 1211 aaKnown RBP21.21■□□□□ 0.99
TSSC4-210ENST00000496468 V9GY48 417 aaPredicted RBP21.21■□□□□ 0.99
TSSC4-210ENST00000496468 JAK2O60674 1132 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 PPP1R11O60927 126 aaPredicted RBP21.2■□□□□ 0.98
TSSC4-210ENST00000496468 SLC25A27O95847 323 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 SLC4A3P48751 1232 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 TRAF1Q13077 416 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 HEATR3Q7Z4Q2 680 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 RIOX2Q8IUF8 465 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 CCAR1Q8IX12 1150 aaKnown RBP21.2■□□□□ 0.98
TSSC4-210ENST00000496468 HOMER2Q9NSB8 354 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 TSKSQ9UJT2 592 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 ABCB11O95342 1321 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 PLXNB2O15031 1838 aa21.2■□□□□ 0.98
TSSC4-210ENST00000496468 hCG_1984214I3L0E3 225 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 DEXIO95424 95 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 ALAS1P13196 640 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 SCG2P13521 617 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 PFKFB3Q16875 520 aaPredicted RBP21.19■□□□□ 0.98
TSSC4-210ENST00000496468 TKFCQ3LXA3 575 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 NCAPG2Q86XI2 1143 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 ZNF713Q8N859 430 aaPredicted RBP21.19■□□□□ 0.98
TSSC4-210ENST00000496468 SHCBP1Q8NEM2 672 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 GPKOWQ92917 476 aaPredicted RBP eCLIP21.19■□□□□ 0.98
TSSC4-210ENST00000496468 CWC22Q9HCG8 908 aaKnown RBP21.19■□□□□ 0.98
TSSC4-210ENST00000496468 RNF146Q9NTX7 359 aa21.19■□□□□ 0.98
TSSC4-210ENST00000496468 ORC3Q9UBD5 711 aaPredicted RBP21.19■□□□□ 0.98
TSSC4-210ENST00000496468 ZSWIM8A7E2V4 1837 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 MGAMO43451 1857 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 GPR25O00155 361 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 ERCC3P19447 782 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 ANP32AP39687 249 aaKnown RBP21.18■□□□□ 0.98
TSSC4-210ENST00000496468 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
TSSC4-210ENST00000496468 CUL4AQ13619 759 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 BECN1Q14457 450 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 Q3C1V9 767 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 WDR78Q5VTH9 848 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 WWC2Q6AWC2 1192 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 DDX11Q96FC9 970 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 PORCNQ9H237 461 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms