RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ARID3AQ99856 593 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 ITIH6Q6UXX5 1313 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 MYH8P13535 1937 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 ESYT2A0FGR8 921 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 TEX33O43247 280 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 PBX1P40424 430 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 STIM1Q13586 685 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 PIGSQ96S52 555 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 MTMR4Q9NYA4 1195 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
CMSS1-208ENST00000496116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.412e-9■■□□□ 13.6
CMSS1-208ENST00000496116 LRRC10BA6NIK2 292 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 H7C1D1 291 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 PDHBP11177 359 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 NPR1P16066 1061 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 TRIM65Q6PJ69 517 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
CMSS1-208ENST00000496116 CCDC47Q96A33 483 aaKnown RBP12.48□□□□□ -0.41
CMSS1-208ENST00000496116 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
CMSS1-208ENST00000496116 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
CMSS1-208ENST00000496116 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
CMSS1-208ENST00000496116 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 N4BP3O15049 544 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 HSPA1LP34931 641 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 GABPAQ06546 454 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 RBL2Q08999 1139 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 KRT31Q15323 416 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 RASGRP2Q7LDG7 609 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 PP2D1A8MPX8 630 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
CMSS1-208ENST00000496116 G3V3G9 751 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 TTLL1O95922 423 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 CCDC175P0C221 793 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 SRGNP10124 158 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
CMSS1-208ENST00000496116 PRCPP42785 496 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 TRIM14Q14142 442 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 KCNJ12Q14500 433 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 TCP11X2Q5H9J9 407 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
CMSS1-208ENST00000496116 CABP7Q86V35 215 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
CMSS1-208ENST00000496116 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
CMSS1-208ENST00000496116 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 PSMA7O14818 248 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 MFAP3LO75121 409 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 PDE6BP35913 854 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-208ENST00000496116 KMT5BQ4FZB7 885 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 ADSSL1Q8N142 457 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 FEZ1Q99689 392 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
CMSS1-208ENST00000496116 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-208ENST00000496116 SNHG28P0DPA3 235 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 AKR1B1P15121 316 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 CASQ1P31415 396 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 PPP1R2P41236 205 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.42
CMSS1-208ENST00000496116 AMPD3Q01432 767 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.42
CMSS1-208ENST00000496116 FBXO41Q8TF61 875 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 CALML4Q96GE6 196 aa12.46□□□□□ -0.42
CMSS1-208ENST00000496116 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.42
CMSS1-208ENST00000496116 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 IGKV6D-41A0A0C4DH26 115 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-208ENST00000496116 PLCG1P19174 1290 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 CASP14P31944 242 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 ADCY7P51828 1080 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 ELF2Q15723 593 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 PPP1R18Q6NYC8 613 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 HHIPL2Q6UWX4 724 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms