RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 GALNT12Q8IXK2 581 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 NUDT8Q8WV74 236 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 PLD4Q96BZ4 506 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
RPGR-210ENST00000494841 COPRSQ9NQ92 184 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 PRDM6Q9NQX0 595 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 LATS2Q9NRM7 1088 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 RIPOR2Q9Y4F9 1068 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 EYA2O00167 538 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 IGHDP01880 384 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 EDN3P14138 238 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 CHRNDQ07001 517 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 PEAR1Q5VY43 1037 aaPredicted RBP9.24□□□□□ -0.93
RPGR-210ENST00000494841 SPACA7Q96KW9 195 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
RPGR-210ENST00000494841 BCL11AQ9H165 835 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 RASSF4Q9H2L5 321 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 JPH1Q9HDC5 661 aaPredicted RBP9.24□□□□□ -0.93
RPGR-210ENST00000494841 EXOC6BQ9Y2D4 811 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
RPGR-210ENST00000494841 RGS9O75916 674 aaPredicted RBP9.23□□□□□ -0.93
RPGR-210ENST00000494841 SASH1O94885 1247 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 MAPK8P45983 427 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 G3BP1Q13283 466 aaKnown RBP eCLIP9.23□□□□□ -0.93
RPGR-210ENST00000494841 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
RPGR-210ENST00000494841 GRIK5Q16478 980 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 METTL24Q5JXM2 366 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 TTC9Q92623 222 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 TMX4Q9H1E5 349 aaPredicted RBP9.23□□□□□ -0.93
RPGR-210ENST00000494841 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 POLLQ9UGP5 575 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
RPGR-210ENST00000494841 FER1L6Q2WGJ9 1857 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 LILRB5O75023 590 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 HMMRO75330 724 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 CIAO1O76071 339 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 AFF1P51825 1210 aaKnown RBP9.22□□□□□ -0.93
RPGR-210ENST00000494841 PRELPP51888 382 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 RASSF7Q02833 373 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 TFCP2Q12800 502 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 OS9Q13438 667 aaPredicted RBP9.22□□□□□ -0.93
RPGR-210ENST00000494841 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 CCDC93Q567U6 631 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 DPP8Q6V1X1 898 aaPredicted RBP9.22□□□□□ -0.93
RPGR-210ENST00000494841 LINC00114Q6XXX2 140 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 TMC4Q7Z404 712 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 TBC1D16Q8TBP0 767 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 HHIPQ96QV1 700 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 ZKSCAN3Q9BRR0 538 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 NPHS2Q9NP85 383 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
RPGR-210ENST00000494841 NOP58Q9Y2X3 529 aaKnown RBP9.22□□□□□ -0.93
RPGR-210ENST00000494841 NFKBIEO00221 500 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 UFL1O94874 794 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 PDE8BO95263 885 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 ERCC3P19447 782 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 IRS1P35568 1242 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 IL15P40933 162 aaPredicted RBP9.21□□□□□ -0.94
RPGR-210ENST00000494841 TIMM10P62072 90 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 RTKN2Q8IZC4 609 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 VGLL2Q8N8G2 317 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 ANKRD2Q9GZV1 360 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 DCTPP1Q9H773 170 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 ZNF277Q9NRM2 450 aaPredicted RBP9.21□□□□□ -0.94
RPGR-210ENST00000494841 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 TRIM33Q9UPN9 1127 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 MROH5Q6ZUA9 1318 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 A0A1B0GUL6 1792 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 SNED1Q8TER0 1413 aa9.21□□□□□ -0.94
RPGR-210ENST00000494841 A0A1W2PP55 124 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 SMARCA5O60264 1052 aaPredicted RBP9.2□□□□□ -0.94
RPGR-210ENST00000494841 TRPA1O75762 1119 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 NID1P14543 1247 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 KLRK1P26718 216 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 KCNJ4P48050 445 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 HDAC1Q13547 482 aaPredicted RBP9.2□□□□□ -0.94
RPGR-210ENST00000494841 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 ADAMTSL4Q6UY14 1074 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 TXNRD3Q86VQ6 643 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 OSMRQ99650 979 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 RWDD1Q9H446 243 aaPredicted RBP9.2□□□□□ -0.94
RPGR-210ENST00000494841 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 ZNF804BA4D1E1 1349 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 XDHP47989 1333 aa9.2□□□□□ -0.94
RPGR-210ENST00000494841 SBF1O95248 1867 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 GRIN3BO60391 1043 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 SMNDC1O75940 238 aaKnown RBP eCLIP9.19□□□□□ -0.94
RPGR-210ENST00000494841 AOC3Q16853 763 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 FBXO33Q7Z6M2 555 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
RPGR-210ENST00000494841 TRIM11Q96F44 468 aa9.19□□□□□ -0.94
RPGR-210ENST00000494841 NEUROD6Q96NK8 337 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms