RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
PCCB-219ENST00000494742 RAVER2Q9HCJ3 691 aaKnown RBP17.43■□□□□ 0.38
PCCB-219ENST00000494742 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
PCCB-219ENST00000494742 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 APPP05067 770 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 ASGR1P07306 291 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 PDE4BQ07343 736 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.383e-6■■□□□ 14
PCCB-219ENST00000494742 CCDC144BQ3MJ40 725 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 PPP4R3BQ5MIZ7 849 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 IFNL3Q8IZI9 196 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 FGD4Q96M96 766 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 MCM3APO60318 1980 aa17.42■□□□□ 0.38
PCCB-219ENST00000494742 CDH23Q9H251 3354 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
PCCB-219ENST00000494742 ARVCFO00192 962 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 SLC3A2P08195 630 aaKnown RBP17.41■□□□□ 0.38
PCCB-219ENST00000494742 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 BMP3P12645 472 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 DNAJB2P25686 324 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 STAT2P52630 851 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 CHURC1Q8WUH1 139 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 GMCL1Q96IK5 515 aa17.41■□□□□ 0.38
PCCB-219ENST00000494742 MYADML2A6NDP7 307 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 M0R2C6 588 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
PCCB-219ENST00000494742 ADCY6O43306 1168 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 PLA2G6O60733 806 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 PRDM1O75626 825 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 TKFCQ3LXA3 575 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 GNASQ5JWF2 1037 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 TMEM199Q8N511 208 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
PCCB-219ENST00000494742 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.4■□□□□ 0.381e-7■■■■□ 20.2
PCCB-219ENST00000494742 KATNBL1Q9H079 304 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 ACAD9Q9H845 621 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
PCCB-219ENST00000494742 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 RASIP1Q5U651 963 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
PCCB-219ENST00000494742 FAM133AQ8N9E0 248 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 VTI1AQ96AJ9 217 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
PCCB-219ENST00000494742 ASB14A6NK59 587 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 ERC2O15083 957 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 CTAGE5O15320 804 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 CABYRO75952 493 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 GRIN2CQ14957 1233 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 PSRC1Q6PGN9 363 aaPredicted RBP17.38■□□□□ 0.37
PCCB-219ENST00000494742 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 TIFAQ96CG3 184 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 ZNF576Q9H609 170 aa17.38■□□□□ 0.37
PCCB-219ENST00000494742 CD4P01730 458 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 SLC1A4P43007 532 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 TFAP4Q01664 338 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 PPARAQ07869 468 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 TMEM240Q5SV17 173 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 C16orf59Q7L2K0 433 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 SLC43A3Q8NBI5 491 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 NAPBQ9H115 298 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 A1CFQ9NQ94 594 aaKnown RBP17.37■□□□□ 0.37
PCCB-219ENST00000494742 HOMER2Q9NSB8 354 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 VCANP13611 3396 aa17.37■□□□□ 0.37
PCCB-219ENST00000494742 CSF2RAP15509 400 aa17.36■□□□□ 0.37
PCCB-219ENST00000494742 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
PCCB-219ENST00000494742 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
PCCB-219ENST00000494742 Q9Y3F1 56 aa17.36■□□□□ 0.37
PCCB-219ENST00000494742 ZNF536O15090 1300 aa17.36■□□□□ 0.37
PCCB-219ENST00000494742 LRRC37A2A6NM11 1700 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 PRUNE2Q8WUY3 3088 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 SOWAHBA6NEL2 793 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
PCCB-219ENST00000494742 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 IQSEC1Q6DN90 963 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 RCSD1Q6JBY9 416 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
PCCB-219ENST00000494742 MTIF3Q9H2K0 278 aaKnown RBP17.35■□□□□ 0.37
PCCB-219ENST00000494742 GNEQ9Y223 722 aaKnown RBP17.35■□□□□ 0.37
PCCB-219ENST00000494742 ZEB2O60315 1214 aa17.34■□□□□ 0.37
PCCB-219ENST00000494742 ZNF365Q70YC5 407 aa17.34■□□□□ 0.37
PCCB-219ENST00000494742 NOL8Q76FK4 1167 aaKnown RBP17.34■□□□□ 0.37
PCCB-219ENST00000494742 TLK2Q86UE8 772 aa17.34■□□□□ 0.37
PCCB-219ENST00000494742 PI4K2BQ8TCG2 481 aa17.34■□□□□ 0.37
PCCB-219ENST00000494742 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
PCCB-219ENST00000494742 FSD1Q9BTV5 496 aa17.34■□□□□ 0.37
PCCB-219ENST00000494742 PBX4Q9BYU1 374 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms