RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 IGHDP01880 384 aa27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 MFAP1P55081 439 aaKnown RBP27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 RRP12Q5JTH9 1297 aaKnown RBP27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 RCSD1Q6JBY9 416 aa27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 FERMT2Q96AC1 680 aa27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 LENG1Q96BZ8 264 aaPredicted RBP27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 PHF24Q9UPV7 400 aa27.98■■■□□ 2.07
RHBDD3-206ENST00000493894 SMCHD1A6NHR9 2005 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 SNAI1O95863 264 aaPredicted RBP27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 NOVP48745 357 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 CCDC96Q2M329 555 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 LRIT3Q3SXY7 679 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 TRIM60Q495X7 471 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 PLEKHM2Q8IWE5 1019 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 OSBPL3Q9H4L5 887 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 RNF146Q9NTX7 359 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 FAM184BQ9ULE4 1060 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 MTMR7Q9Y216 660 aa27.97■■■□□ 2.07
RHBDD3-206ENST00000493894 ZNF536O15090 1300 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 TKFCQ3LXA3 575 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 C1orf53Q5VUE5 145 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 RASGRP2Q7LDG7 609 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 DCAF4Q8WV16 495 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 AGBL1Q96MI9 1066 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 LTBP2Q14767 1821 aa27.96■■■□□ 2.07
RHBDD3-206ENST00000493894 SDSP20132 328 aa27.95■■■□□ 2.06
RHBDD3-206ENST00000493894 HAND2P61296 217 aa27.95■■■□□ 2.06
RHBDD3-206ENST00000493894 FGD4Q96M96 766 aa27.95■■■□□ 2.06
RHBDD3-206ENST00000493894 PRDM5Q9NQX1 630 aaPredicted RBP27.95■■■□□ 2.06
RHBDD3-206ENST00000493894 PRR12Q9ULL5 1215 aa27.95■■■□□ 2.06
RHBDD3-206ENST00000493894 SYNRGQ9UMZ2 1314 aa27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 ADAMTS4O75173 837 aa27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 PCP11498 1178 aaKnown RBP27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 CCDC174Q6PII3 467 aa27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 ABHD16BQ9H3Z7 469 aa27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 A1CFQ9NQ94 594 aaKnown RBP27.94■■■□□ 2.06
RHBDD3-206ENST00000493894 POTEB2H3BUK9 544 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 TOP1P11387 765 aaKnown RBP27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 ALAS1P13196 640 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 ACVR2BQ13705 512 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 ARMCX2Q7L311 632 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 TRERF1Q96PN7 1200 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 DIAPH3Q9NSV4 1193 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 TCP11L1Q9NUJ3 509 aa27.93■■■□□ 2.06
RHBDD3-206ENST00000493894 A0A1W2PQ45 241 aaPredicted RBP27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 A0A1W2PQY0 241 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 AKNAD1Q5T1N1 836 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 GPR153Q6NV75 609 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 MFSD6Q6ZSS7 791 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 TMEM47Q9BQJ4 181 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 RNF41Q9H4P4 317 aaPredicted RBP27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 PDLIM7Q9NR12 457 aa27.92■■■□□ 2.06
RHBDD3-206ENST00000493894 DUSP11O75319 330 aaKnown RBP27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 SNAP25P60880 206 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 CNTN2Q02246 1040 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 TBC1D10CQ8IV04 446 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 CCDC144CPQ8IYA2 1237 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 FAM133AQ8N9E0 248 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 TSEN34Q9BSV6 310 aaKnown RBP27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 CCPG1Q9ULG6 757 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 MCM3APO60318 1980 aa27.91■■■□□ 2.06
RHBDD3-206ENST00000493894 LAMA4Q16363 1823 aa27.9■■■□□ 2.06
RHBDD3-206ENST00000493894 HIP1O00291 1037 aa27.9■■■□□ 2.06
RHBDD3-206ENST00000493894 MOXD2PA6NHM9 499 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 ACLYP53396 1101 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 CCDC144BQ3MJ40 725 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 CWC27Q6UX04 472 aaKnown RBP27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 NUP133Q8WUM0 1156 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 SPC25Q9HBM1 224 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 STARD7Q9NQZ5 370 aa27.89■■■□□ 2.06
RHBDD3-206ENST00000493894 ICAM1P05362 532 aa27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 CST5P28325 142 aaPredicted RBP27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 TLE2Q04725 743 aa27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 SYDE2Q5VT97 1194 aa27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 BTNL9Q6UXG8 535 aa27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 ESR2Q92731 530 aa27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 RANBP17Q9H2T7 1088 aaKnown RBP27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 FRMPD2Q68DX3 1309 aaPredicted RBP27.88■■■□□ 2.05
RHBDD3-206ENST00000493894 ASB14A6NK59 587 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 ZNF213O14771 459 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 SLC16A2P36021 539 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 MUM1L1Q5H9M0 696 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 TTBK2Q6IQ55 1244 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 KLHDC9Q8NEP7 349 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 TTC14Q96N46 770 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 CYP39A1Q9NYL5 469 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 NEDD4P46934 1319 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 LRRC37A2A6NM11 1700 aa27.87■■■□□ 2.05
RHBDD3-206ENST00000493894 SOWAHBA6NEL2 793 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 ADCY6O43306 1168 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 CLTBP09497 229 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 C6orf222P0C671 652 aaPredicted RBP27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 PDHBP11177 359 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 NT5C2P49902 561 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 NSMFQ6X4W1 530 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 KATNBL1Q9H079 304 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 GPCPD1Q9NPB8 672 aa27.86■■■□□ 2.05
RHBDD3-206ENST00000493894 TRIM43BA6NCK2 446 aa27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 MYADML2A6NDP7 307 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms