RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MFAP3LO75121 409 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 URI1O94763 535 aaPredicted RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 RHOBTB3O94955 611 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 KCNJ12Q14500 433 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 KRT31Q15323 416 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 SLC4A8Q2Y0W8 1093 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 TCP11X2Q5H9J9 407 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 MAGEC2Q9UBF1 373 aaPredicted RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 TTF2Q9UNY4 1162 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 UBR3Q6ZT12 1888 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 A0A1W2PQC6 194 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 TEX33O43247 280 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 COPB1P53618 953 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 GNG11P61952 73 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 RBL2Q08999 1139 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 GRIK5Q16478 980 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 FAM182BQ5T319 152 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 TYW1BQ6NUM6 668 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 CABP7Q86V35 215 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 SLC44A5Q8NCS7 719 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 IQCDQ96DY2 449 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 MTRQ99707 1265 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 NAP1L4Q99733 375 aaKnown RBP10.86□□□□□ -0.67
NPHP3-209ENST00000493732 GLT8D2Q9H1C3 349 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 ATP6V0A2Q9Y487 856 aa10.86□□□□□ -0.67
NPHP3-209ENST00000493732 AFF2P51816 1311 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
NPHP3-209ENST00000493732 KIF5CO60282 957 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 CASP1P29466 404 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 ALDH1B1P30837 517 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 TMEM266Q2M3C6 531 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 COBLL1Q53SF7 1204 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 CYP26C1Q6V0L0 522 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 RASGRP2Q7LDG7 609 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 SMYD4Q8IYR2 804 aaPredicted RBP10.85□□□□□ -0.67
NPHP3-209ENST00000493732 RASGRP4Q8TDF6 673 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 STAMQ92783 540 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 ZC3H12CQ9C0D7 883 aaKnown RBP10.85□□□□□ -0.67
NPHP3-209ENST00000493732 MTMR4Q9NYA4 1195 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 MYO1AQ9UBC5 1043 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 POLLQ9UGP5 575 aa10.85□□□□□ -0.67
NPHP3-209ENST00000493732 DDX41Q9UJV9 622 aaKnown RBP10.85□□□□□ -0.67
NPHP3-209ENST00000493732 POLRMTO00411 1230 aaKnown RBP10.84□□□□□ -0.67
NPHP3-209ENST00000493732 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PRCPP42785 496 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 ELF2Q15723 593 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 LETM2Q2VYF4 491 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 NLGN1Q8N2Q7 840 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 NUP58Q9BVL2 599 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 DAGLAQ9Y4D2 1042 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 BAZ2BQ9UIF8 2168 aaKnown RBP10.84□□□□□ -0.67
NPHP3-209ENST00000493732 TTLL1O95922 423 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 HLA-DOAP06340 250 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 GOLGA8HP0CJ92 632 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PDHBP11177 359 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 CASP14P31944 242 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 DNM2P50570 870 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 ADCY7P51828 1080 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 GABPAQ06546 454 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PDIA5Q14554 519 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 SLC35G1Q2M3R5 365 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 KMT5BQ4FZB7 885 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 GPATCH4Q5T3I0 446 aaKnown RBP10.84□□□□□ -0.67
NPHP3-209ENST00000493732 CNNM4Q6P4Q7 775 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 HHIPL2Q6UWX4 724 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 TOGARAM2Q6ZUX3 1019 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PKNOX2Q96KN3 472 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
NPHP3-209ENST00000493732 TMEM60Q9H2L4 133 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 EXOC1Q9NV70 894 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 SERPINB13Q9UIV8 391 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 PARP3Q9Y6F1 533 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 MYH1P12882 1939 aa10.84□□□□□ -0.67
NPHP3-209ENST00000493732 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 CDK5RAP2Q96SN8 1893 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 SLC26A4O43511 780 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms