RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 METTL16Q86W50 562 aaKnown RBP14.44□□□□□ -0.1
UPF3A-210ENST00000493727 MAPKAPK5Q8IW41 473 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 LRRN4Q8WUT4 740 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 ESYT1Q9BSJ8 1104 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 TMOD4Q9NZQ9 345 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 CDH23Q9H251 3354 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 HMGCRP04035 888 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 MFAP1P55081 439 aaKnown RBP14.43□□□□□ -0.1
UPF3A-210ENST00000493727 BACE1P56817 501 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 IRX3P78415 501 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-210ENST00000493727 MCMDC2Q4G0Z9 681 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 MIGA1Q8NAN2 632 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 MAP10Q9P2G4 905 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 GJD2Q9UKL4 321 aa14.43□□□□□ -0.1
UPF3A-210ENST00000493727 TCRBV5S4A2TA0A5A2 114 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 M0R2C6 588 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 HOXA7P31268 230 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-210ENST00000493727 KIAA1211Q6ZU35 1233 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 ADGRA1Q86SQ6 560 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 ASCC2Q9H1I8 757 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-210ENST00000493727 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 FRMPD3Q5JV73 1810 aa14.42□□□□□ -0.1
UPF3A-210ENST00000493727 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 MAGEB6P1A0A0J9YX57 407 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 SGSM2O43147 1006 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 REC8O95072 547 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 MBD4O95243 580 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 USP5P45974 858 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 TRIM32Q13049 653 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 RRP1BQ14684 758 aaKnown RBP14.41□□□□□ -0.1
UPF3A-210ENST00000493727 CCDC129Q6ZRS4 1044 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 C7orf61Q8IZ16 206 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 GTF3C2Q8WUA4 911 aaPredicted RBP14.41□□□□□ -0.1
UPF3A-210ENST00000493727 OSBP2Q969R2 916 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
UPF3A-210ENST00000493727 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
UPF3A-210ENST00000493727 DNAJC18Q9H819 358 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
UPF3A-210ENST00000493727 ANO2Q9NQ90 1003 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
UPF3A-210ENST00000493727 ZBTB24O43167 697 aaPredicted RBP14.4□□□□□ -0.1
UPF3A-210ENST00000493727 GPAA1O43292 621 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 LRIT3Q3SXY7 679 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 TTC6Q86TZ1 520 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 EHD4Q9H223 541 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 OGDHLQ9ULD0 1010 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 ZBTB21Q9ULJ3 1066 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 ZMYND8Q9ULU4 1186 aaPredicted RBP14.4□□□□□ -0.1
UPF3A-210ENST00000493727 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
UPF3A-210ENST00000493727 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
UPF3A-210ENST00000493727 MYH8P13535 1937 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 CTHP32929 405 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
UPF3A-210ENST00000493727 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 ZNF589Q86UQ0 364 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-210ENST00000493727 BANK1Q8NDB2 785 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 TRIB2Q92519 343 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 ARMT1Q9H993 441 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 HMX1Q9NP08 348 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-210ENST00000493727 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
UPF3A-210ENST00000493727 SERPINB13Q9UIV8 391 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 PRUNE2Q8WUY3 3088 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 PFASO15067 1338 aa14.39□□□□□ -0.11
UPF3A-210ENST00000493727 GDF11O95390 407 aa14.38□□□□□ -0.11
UPF3A-210ENST00000493727 GNAT2P19087 354 aa14.38□□□□□ -0.11
UPF3A-210ENST00000493727 MAGEA10P43363 369 aaPredicted RBP14.38□□□□□ -0.11
UPF3A-210ENST00000493727 USP17L2Q6R6M4 530 aa14.38□□□□□ -0.11
UPF3A-210ENST00000493727 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
UPF3A-210ENST00000493727 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
UPF3A-210ENST00000493727 IL25Q9H293 177 aa14.38□□□□□ -0.11
UPF3A-210ENST00000493727 APPP05067 770 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 MAPK4P31152 587 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 USP14P54578 494 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 HERVK_113P62684 666 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 TATDN1Q6P1N9 297 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 Q7L0L9 218 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
UPF3A-210ENST00000493727 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
UPF3A-210ENST00000493727 TDHQ8IZJ6 230 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 GPRC5AQ8NFJ5 357 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 SOCS4Q8WXH5 440 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 C11orf49Q9H6J7 331 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 SLC4A4Q9Y6R1 1079 aa14.37□□□□□ -0.11
UPF3A-210ENST00000493727 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
UPF3A-210ENST00000493727 GH2P01242 217 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 COL6A1P12109 1028 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 SYN1P17600 705 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 MCCP23508 829 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 TRMT44Q8IYL2 757 aaKnown RBP14.36□□□□□ -0.11
UPF3A-210ENST00000493727 C12orf42Q96LP6 360 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
UPF3A-210ENST00000493727 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
UPF3A-210ENST00000493727 FEZ1Q99689 392 aa14.36□□□□□ -0.11
UPF3A-210ENST00000493727 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
UPF3A-210ENST00000493727 NACAP1Q9BZK3 213 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms