RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 PDE6BP35913 854 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
CLIP4-212ENST00000493551 SSPNQ14714 243 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 DEFB132Q7Z7B7 95 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 DHX38Q92620 1227 aaKnown RBP6.64□□□□□ -1.35
CLIP4-212ENST00000493551 PLPPR2Q96GM1 343 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 SLC52A1Q9NWF4 448 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 TBX22Q9Y458 520 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 ANKRD30AQ9BXX3 1397 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 MST1RQ04912 1400 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 VPS8Q8N3P4 1428 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 TMEM131LA2VDJ0 1609 aa6.64□□□□□ -1.35
CLIP4-212ENST00000493551 EGR3Q06889 387 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 CDH24Q86UP0 819 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 LMTK2Q8IWU2 1503 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 LRRC59Q96AG4 307 aaKnown RBP6.63□□□□□ -1.35
CLIP4-212ENST00000493551 RBCK1Q9BYM8 510 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 DUSP15Q9H1R2 295 aaPredicted RBP6.63□□□□□ -1.35
CLIP4-212ENST00000493551 DUSP13Q9UII6 198 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
CLIP4-212ENST00000493551 NHSL1Q5SYE7 1610 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 TRPM2O94759 1503 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 SETD5Q9C0A6 1442 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 PI3P19957 117 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 ETV3P41162 512 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 SNX17Q15036 470 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLIP4-212ENST00000493551 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
CLIP4-212ENST00000493551 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLIP4-212ENST00000493551 SYTL4Q96C24 671 aaPredicted RBP6.62□□□□□ -1.35
CLIP4-212ENST00000493551 SIGLEC10Q96LC7 697 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 ORAI2Q96SN7 254 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 GPATCH2Q9NW75 528 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 IRAK3Q9Y616 596 aa6.62□□□□□ -1.35
CLIP4-212ENST00000493551 METP08581 1390 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 ITGAEP38570 1179 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 CHRNEQ04844 493 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 SPPL2CQ8IUH8 684 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 Q96M66 194 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 SRCIN1Q9C0H9 1055 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 TRPC5Q9UL62 973 aaPredicted RBP6.61□□□□□ -1.35
CLIP4-212ENST00000493551 UNC13BO14795 1591 aa6.61□□□□□ -1.35
CLIP4-212ENST00000493551 NALCNQ8IZF0 1738 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 FBXO24O75426 580 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 AFF3P51826 1226 aaKnown RBP6.6□□□□□ -1.35
CLIP4-212ENST00000493551 ZXDCQ2QGD7 858 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-212ENST00000493551 PCNX4Q63HM2 1172 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 SP8Q8IXZ3 490 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 DACT3Q96B18 629 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-212ENST00000493551 GPR160Q9UJ42 338 aa6.6□□□□□ -1.35
CLIP4-212ENST00000493551 ANKRD50Q9ULJ7 1429 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 NCOA3Q9Y6Q9 1424 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 GRK4P32298 578 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 PTPN11Q06124 597 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-212ENST00000493551 SPATS1Q496A3 300 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 WIPI1Q5MNZ9 446 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-212ENST00000493551 TSPYL5Q86VY4 417 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-212ENST00000493551 FEZF2Q8TBJ5 459 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 GPR62Q9BZJ7 368 aa6.59□□□□□ -1.35
CLIP4-212ENST00000493551 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
CLIP4-212ENST00000493551 C1orf167Q5SNV9 1468 aa6.59□□□□□ -1.36
CLIP4-212ENST00000493551 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.36
CLIP4-212ENST00000493551 ATRNO75882 1429 aa6.59□□□□□ -1.36
CLIP4-212ENST00000493551 ADGRL3Q9HAR2 1447 aa6.59□□□□□ -1.36
CLIP4-212ENST00000493551 E9PCH4 1651 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 OR14I1A6ND48 311 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 DUSP4Q13115 394 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 ANKS4BQ8N8V4 417 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 PANK1Q8TE04 598 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 PPP1R13LQ8WUF5 828 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 GAL3ST3Q96A11 431 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 TEPSINQ96N21 525 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 MBD1Q9UIS9 605 aaPredicted RBP6.58□□□□□ -1.36
CLIP4-212ENST00000493551 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
CLIP4-212ENST00000493551 HRKO00198 91 aa6.57□□□□□ -1.36
CLIP4-212ENST00000493551 EFEMP1Q12805 493 aa6.57□□□□□ -1.36
CLIP4-212ENST00000493551 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
CLIP4-212ENST00000493551 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
CLIP4-212ENST00000493551 PCDHA11Q9Y5I1 949 aa6.57□□□□□ -1.36
CLIP4-212ENST00000493551 RPRD2Q5VT52 1461 aaKnown RBP6.57□□□□□ -1.36
CLIP4-212ENST00000493551 DCCP43146 1447 aa6.57□□□□□ -1.36
CLIP4-212ENST00000493551 PIK3R4Q99570 1358 aa6.57□□□□□ -1.36
CLIP4-212ENST00000493551 PNMA6FA0A0J9YX94 578 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 ZC3H12DA2A288 527 aaKnown RBP6.56□□□□□ -1.36
CLIP4-212ENST00000493551 PSPNO60542 156 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 CELA3AP09093 270 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 SRSF3P84103 164 aaKnown RBP6.56□□□□□ -1.36
CLIP4-212ENST00000493551 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 SHISA4Q96DD7 197 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 NUP155O75694 1391 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 ROBO2Q9HCK4 1378 aa6.56□□□□□ -1.36
CLIP4-212ENST00000493551 SRCAPQ6ZRS2 3230 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 BCL9LQ86UU0 1499 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 RALGAPBQ86X10 1494 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms