RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 FEM1BQ9UK73 627 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 PPP1R9AQ9ULJ8 1098 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 DLL1O00548 723 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 SH2B2O14492 632 aaPredicted RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 SEC24BO95487 1268 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 SYN1P17600 705 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 CASTP20810 708 aaKnown RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 RGS2P41220 211 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 ERVK-24P63145 666 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 PLS1Q14651 629 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
CTSA-209ENST00000493522 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
CTSA-209ENST00000493522 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 CNMDO75829 334 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
CTSA-209ENST00000493522 CPA1P15085 419 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 PSMA5P28066 241 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 MAGEA10P43363 369 aaPredicted RBP13.53□□□□□ -0.24
CTSA-209ENST00000493522 FGD1P98174 961 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 LRIT3Q3SXY7 679 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 DHX32Q7L7V1 743 aaKnown RBP13.53□□□□□ -0.24
CTSA-209ENST00000493522 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
CTSA-209ENST00000493522 IGDCC4Q8TDY8 1250 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 CHURC1Q8WUH1 139 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 APBA2Q99767 749 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 BTBD7Q9P203 1132 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 PFASO15067 1338 aa13.53□□□□□ -0.24
CTSA-209ENST00000493522 CUL9Q8IWT3 2517 aa13.52□□□□□ -0.24
CTSA-209ENST00000493522 VWA5AO00534 786 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
CTSA-209ENST00000493522 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 CCNA1P78396 465 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.25
CTSA-209ENST00000493522 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.25
CTSA-209ENST00000493522 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 WDR78Q5VTH9 848 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 POTEEQ6S8J3 1075 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 GPR142Q7Z601 462 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 CATIPQ7Z7H3 387 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 NUP133Q8WUM0 1156 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 USP6NLQ92738 828 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 UBE2OQ9C0C9 1292 aaKnown RBP13.52□□□□□ -0.25
CTSA-209ENST00000493522 PORCNQ9H237 461 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 LCTP09848 1927 aa13.52□□□□□ -0.25
CTSA-209ENST00000493522 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
CTSA-209ENST00000493522 ZBED4O75132 1171 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 DDAH1O94760 285 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 COL6A1P12109 1028 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 SLC16A2P36021 539 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 GRM4Q14833 912 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 Q3C1V9 767 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 MORN1Q5T089 497 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 MYL10Q9BUA6 226 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 SPATC1LQ9H0A9 340 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 MCM3APO60318 1980 aa13.51□□□□□ -0.25
CTSA-209ENST00000493522 PLA2G6O60733 806 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 CCND3P30281 292 aaPredicted RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 LIFRP42702 1097 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 ANAPC15P60006 121 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 EXOSC10Q01780 885 aaKnown RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 TMEM132BQ14DG7 1078 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 CCDC174Q6PII3 467 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 Q6ZUG5 572 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 CPXCR1Q8N123 301 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 TMTC2Q8N394 836 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 CPVLQ9H3G5 476 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
CTSA-209ENST00000493522 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms