RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 MYH7P12883 1935 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 ARMCX2Q7L311 632 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 GMCL1P1Q8NEA9 526 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 NUP88Q99567 741 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
SNRNP200-207ENST00000493271 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 ASB14A6NK59 587 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 TTLL1O95922 423 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 CD4P01730 458 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 CSF2RAP15509 400 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 LRRFIP1Q32MZ4 808 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 USP38Q8NB14 1042 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 HERVK_113Q902F9 699 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 APPBP2Q92624 585 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
SNRNP200-207ENST00000493271 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 GSG1L2A8MUP6 293 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 ZEB2O60315 1214 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 ASB2Q96Q27 587 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 Q9Y3F1 56 aa13.11□□□□□ -0.31
SNRNP200-207ENST00000493271 FGBP02675 491 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 BMP3P12645 472 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 TDO2P48775 406 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 STAT2P52630 851 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 PDE4BQ07343 736 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 FGD4Q96M96 766 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 PRDM12Q9H4Q4 367 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
SNRNP200-207ENST00000493271 CTAGE5O15320 804 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 ADCY6O43306 1168 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 PLA2G6O60733 806 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 PFKMP08237 780 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 PBX2P40425 430 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 GMCL1Q96IK5 515 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
SNRNP200-207ENST00000493271 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 GPAA1O43292 621 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 CHGBP05060 677 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 ACRP10323 421 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 COL9A1P20849 921 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 CYP2C18P33260 490 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 FSCN1Q16658 493 aaKnown RBP13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms