RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 SPP2Q13103 211 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 SECISBP2LQ93073 1101 aaKnown RBP7.07□□□□□ -1.28
NF1-215ENST00000493220 FOXP1Q9H334 677 aaPredicted RBP7.07□□□□□ -1.28
NF1-215ENST00000493220 LRWD1Q9UFC0 647 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 COL18A1P39060 1754 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 DDNO94850 711 aaPredicted RBP7.07□□□□□ -1.28
NF1-215ENST00000493220 SLC25A27O95847 323 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 FCER1AP12319 257 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 NAP1L1P55209 391 aaKnown RBP7.07□□□□□ -1.28
NF1-215ENST00000493220 MTMR2Q13614 643 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 CCDC40Q4G0X9 1142 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 PLCD3Q8N3E9 789 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 SLC17A8Q8NDX2 589 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 CEP95Q96GE4 821 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 ZNF215Q9UL58 517 aaPredicted RBP7.07□□□□□ -1.28
NF1-215ENST00000493220 ASB14A6NK59 587 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 TXKP42681 527 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 FKBP1BP68106 108 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 NOSTRINQ8IVI9 506 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 DRC1Q96MC2 740 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 TRERF1Q96PN7 1200 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 NBPF3Q9H094 633 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 ACAD9Q9H845 621 aa7.07□□□□□ -1.28
NF1-215ENST00000493220 VWA3AA6NCI4 1184 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SEC24BO95487 1268 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SYT1P21579 422 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 MARCKSP29966 332 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 MRE11P49959 708 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 CAMK4Q16566 473 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 PPP4R3CPQ6ZMV5 832 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 ERO1BQ86YB8 467 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 CCDC97Q96F63 343 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 WDR11Q9BZH6 1224 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 TPCN1Q9ULQ1 816 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 DUOX1Q9NRD9 1551 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 MANSC4A6NHS7 340 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 RDXP35241 583 aaKnown RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 COG2Q14746 738 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 TSGA10IPQ3SY00 556 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 LRP10Q7Z4F1 713 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 REM2Q8IYK8 340 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 GLG1Q92896 1179 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 DHX58Q96C10 678 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 CCL15-CCL14A0A0B4J2E2 113 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 DDX39AO00148 427 aaKnown RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 IFNAR1P17181 557 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SLC16A2P36021 539 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SSR1P43307 286 aaKnown RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 CCL15Q16663 113 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SNRNP48Q6IEG0 339 aaKnown RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 CHADLQ6NUI6 762 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 KCNV1Q6PIU1 500 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 TMTC3Q6ZXV5 915 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 MB21D2Q8IYB1 491 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 GPKOWQ92917 476 aaPredicted RBP eCLIP7.06□□□□□ -1.282e-6■■■■□ 21.7
NF1-215ENST00000493220 MAP7D2Q96T17 732 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 TMEM39BQ9GZU3 492 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 KCNJ14Q9UNX9 436 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 PSMA7O14818 248 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SCRN1Q12765 414 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 ORC2Q13416 577 aaPredicted RBP7.06□□□□□ -1.28
NF1-215ENST00000493220 PRR16Q569H4 304 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 HS2ST1Q7LGA3 356 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 SNX29Q8TEQ0 813 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 DEF6Q9H4E7 631 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 TRPC6Q9Y210 931 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 LTBP3Q9NS15 1303 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 NRAPQ86VF7 1730 aa7.06□□□□□ -1.28
NF1-215ENST00000493220 CALUO43852 315 aaPredicted RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 OR52Z1P0C646 297 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 CCDC172P0C7W6 258 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 AKR1B1P15121 316 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 TMOD1P28289 359 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 CNNM4Q6P4Q7 775 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 TRMT1LQ7Z2T5 733 aaKnown RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 VGLL2Q8N8G2 317 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 ATP6V0A1Q93050 837 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 FAM163AQ96GL9 167 aaPredicted RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 F5H6K3 240 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 RPL13P26373 211 aaKnown RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 NASPP49321 788 aaPredicted RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 FCGRTP55899 365 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 KLRC3Q07444 240 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 STXBP2Q15833 593 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 ODR4Q5SWX8 454 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 CABP7Q86V35 215 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 VPS36Q86VN1 386 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 PROM2Q8N271 834 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 PRMT6Q96LA8 375 aaPredicted RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 MTMR4Q9NYA4 1195 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 PFASO15067 1338 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 GLTPD2A6NH11 291 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 UBXN2AP68543 259 aa7.05□□□□□ -1.28
NF1-215ENST00000493220 DNM1Q05193 864 aaKnown RBP7.05□□□□□ -1.28
NF1-215ENST00000493220 TFDP1Q14186 410 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms